Mercurial > repos > stemcellcommons > chipseq_workflows

changeset 6:e6d80da34425 draft

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Uploaded a new version of hg19
author stemcellcommons
date Fri, 22 Jul 2016 14:33:29 -0400
parents 4bf23bc4f4e2
children f9ffbe563402
files TF_ChIP-Seq_analysis_using_MACS2__hg19.ga
diffstat 1 files changed, 31 insertions(+), 84 deletions(-) [+]
line wrap: on
line diff
--- a/TF_ChIP-Seq_analysis_using_MACS2__hg19.ga	Fri Jul 22 00:07:10 2016 -0400
+++ b/TF_ChIP-Seq_analysis_using_MACS2__hg19.ga	Fri Jul 22 14:33:29 2016 -0400
@@ -27,7 +27,7 @@
             "tool_state": "{\"name\": \"exp_file\"}", 
             "tool_version": null, 
             "type": "data_input", 
-            "uuid": "f48e77b8-7d87-4b9f-bac1-6bd9748addab", 
+            "uuid": "dd984d64-daac-4547-9989-9303056523d3", 
             "workflow_outputs": []
         }, 
         "1": {
@@ -53,7 +53,7 @@
             "tool_state": "{\"name\": \"input_file\"}", 
             "tool_version": null, 
             "type": "data_input", 
-            "uuid": "d38090b9-b25b-4fea-948e-f5818b1d2d4f", 
+            "uuid": "7a325193-5665-4aaf-9b87-c719769f9b71", 
             "workflow_outputs": []
         }, 
         "2": {
@@ -66,12 +66,7 @@
                     "output_name": "output"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool FASTQ Parallel Groomer", 
-                    "name": "input_file"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "FASTQ Parallel Groomer", 
             "outputs": [
@@ -93,10 +88,10 @@
                 "owner": "kevyin", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"__page__\": 0, \"input_type\": \"\\\"sanger\\\"\", \"__rerun_remap_job_id__\": null, \"options_type\": \"{\\\"output_type\\\": \\\"sanger\\\", \\\"force_quality_encoding\\\": \\\"ascii\\\", \\\"__current_case__\\\": 1, \\\"options_type_selector\\\": \\\"advanced\\\", \\\"summarize_input\\\": \\\"dont_summarize_input\\\"}\", \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}", 
+            "tool_state": "{\"__page__\": 0, \"input_type\": \"\\\"sanger\\\"\", \"__rerun_remap_job_id__\": null, \"options_type\": \"{\\\"output_type\\\": \\\"sanger\\\", \\\"force_quality_encoding\\\": \\\"ascii\\\", \\\"__current_case__\\\": 1, \\\"options_type_selector\\\": \\\"advanced\\\", \\\"summarize_input\\\": \\\"dont_summarize_input\\\"}\", \"input_file\": \"null\"}", 
             "tool_version": "0.3.1", 
             "type": "tool", 
-            "uuid": "c2e08189-33e3-40bf-a914-cfdb726734e5", 
+            "uuid": "83fb115f-30f9-4971-a6dc-416bc1206f1f", 
             "workflow_outputs": []
         }, 
         "3": {
@@ -109,12 +104,7 @@
                     "output_name": "output"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool FASTQ Parallel Groomer", 
-                    "name": "input_file"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "FASTQ Parallel Groomer", 
             "outputs": [
@@ -136,10 +126,10 @@
                 "owner": "kevyin", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"__page__\": 0, \"input_type\": \"\\\"sanger\\\"\", \"__rerun_remap_job_id__\": null, \"options_type\": \"{\\\"output_type\\\": \\\"sanger\\\", \\\"force_quality_encoding\\\": \\\"ascii\\\", \\\"__current_case__\\\": 1, \\\"options_type_selector\\\": \\\"advanced\\\", \\\"summarize_input\\\": \\\"dont_summarize_input\\\"}\", \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}", 
+            "tool_state": "{\"__page__\": 0, \"input_type\": \"\\\"sanger\\\"\", \"__rerun_remap_job_id__\": null, \"options_type\": \"{\\\"output_type\\\": \\\"sanger\\\", \\\"force_quality_encoding\\\": \\\"ascii\\\", \\\"__current_case__\\\": 1, \\\"options_type_selector\\\": \\\"advanced\\\", \\\"summarize_input\\\": \\\"dont_summarize_input\\\"}\", \"input_file\": \"null\"}", 
             "tool_version": "0.3.1", 
             "type": "tool", 
-            "uuid": "7b72130c-3620-4406-b127-aa2d7a1323db", 
+            "uuid": "259e1093-ff1c-4f65-8432-97d5124af250", 
             "workflow_outputs": []
         }, 
         "4": {
@@ -152,12 +142,7 @@
                     "output_name": "output_file"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool Map with Bowtie for Illumina", 
-                    "name": "singlePaired"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "Map with Bowtie for Illumina", 
             "outputs": [
@@ -195,10 +180,10 @@
                 "owner": "devteam", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"suppressHeader\": \"\\\"false\\\"\", \"__page__\": 0, \"__rerun_remap_job_id__\": null, \"refGenomeSource\": \"{\\\"genomeSource\\\": \\\"indexed\\\", \\\"index\\\": \\\"hg19\\\", \\\"__current_case__\\\": 0}\", \"singlePaired\": \"{\\\"sInput1\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"sParams\\\": {\\\"sForwardAlign\\\": \\\"forward\\\", \\\"sTrimH\\\": \\\"0\\\", \\\"sTrimL\\\": \\\"0\\\", \\\"sUnmappedFile\\\": \\\"false\\\", \\\"sSettingsType\\\": \\\"full\\\", \\\"sSuppressAlign\\\": \\\"1\\\", \\\"sAlignLimit\\\": \\\"-1\\\", \\\"sMaxFile\\\": \\\"false\\\", \\\"sReverseAlign\\\": \\\"reverse\\\", \\\"__current_case__\\\": 1, \\\"sSkip\\\": \\\"0\\\", \\\"sBestOption\\\": {\\\"sTryHardOption\\\": {\\\"sTryHard\\\": \\\"noTryHard\\\", \\\"__current_case__\\\": 0, \\\"snMaxBacktracks\\\": \\\"125\\\"}, \\\"sBest\\\": \\\"noBest\\\", \\\"__current_case__\\\": 0}, \\\"alignModeOption\\\": {\\\"sMismatchSeed\\\": \\\"2\\\", \\\"sMismatchQual\\\": \\\"70\\\", \\\"sRounding\\\": \\\"round\\\", \\\"__current_case__\\\": 0, \\\"alignMode\\\": \\\"nMode\\\", \\\"sSeedLen\\\": \\\"28\\\"}, \\\"sOffrate\\\": \\\"-1\\\", \\\"sSeed\\\": \\\"0\\\", \\\"sAllValAlignsOption\\\": {\\\"sAllValAligns\\\": \\\"noAllValAligns\\\", \\\"sValAlign\\\": \\\"1\\\", \\\"__current_case__\\\": 0}}, \\\"sPaired\\\": \\\"single\\\", \\\"__current_case__\\\": 0}\"}", 
+            "tool_state": "{\"suppressHeader\": \"\\\"false\\\"\", \"__page__\": 0, \"__rerun_remap_job_id__\": null, \"refGenomeSource\": \"{\\\"genomeSource\\\": \\\"indexed\\\", \\\"index\\\": \\\"hg19\\\", \\\"__current_case__\\\": 0}\", \"singlePaired\": \"{\\\"sInput1\\\": null, \\\"sParams\\\": {\\\"sForwardAlign\\\": \\\"forward\\\", \\\"sTrimH\\\": \\\"0\\\", \\\"sTrimL\\\": \\\"0\\\", \\\"sUnmappedFile\\\": \\\"false\\\", \\\"sSettingsType\\\": \\\"full\\\", \\\"sSuppressAlign\\\": \\\"1\\\", \\\"sAlignLimit\\\": \\\"-1\\\", \\\"sMaxFile\\\": \\\"false\\\", \\\"sReverseAlign\\\": \\\"reverse\\\", \\\"__current_case__\\\": 1, \\\"sSkip\\\": \\\"0\\\", \\\"sBestOption\\\": {\\\"sTryHardOption\\\": {\\\"sTryHard\\\": \\\"noTryHard\\\", \\\"__current_case__\\\": 0, \\\"snMaxBacktracks\\\": \\\"125\\\"}, \\\"sBest\\\": \\\"noBest\\\", \\\"__current_case__\\\": 0}, \\\"alignModeOption\\\": {\\\"sMismatchSeed\\\": \\\"2\\\", \\\"sMismatchQual\\\": \\\"70\\\", \\\"sRounding\\\": \\\"round\\\", \\\"__current_case__\\\": 0, \\\"alignMode\\\": \\\"nMode\\\", \\\"sSeedLen\\\": \\\"28\\\"}, \\\"sOffrate\\\": \\\"-1\\\", \\\"sSeed\\\": \\\"0\\\", \\\"sAllValAlignsOption\\\": {\\\"sAllValAligns\\\": \\\"noAllValAligns\\\", \\\"sValAlign\\\": \\\"1\\\", \\\"__current_case__\\\": 0}}, \\\"sPaired\\\": \\\"single\\\", \\\"__current_case__\\\": 0}\"}", 
             "tool_version": "1.1.3", 
             "type": "tool", 
-            "uuid": "c90992f7-766c-4395-b9c4-da4bd2e51840", 
+            "uuid": "cd8dda4a-0a66-415c-98f0-0d6361a1abb0", 
             "workflow_outputs": []
         }, 
         "5": {
@@ -211,12 +196,7 @@
                     "output_name": "output_file"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool Map with Bowtie for Illumina", 
-                    "name": "singlePaired"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "Map with Bowtie for Illumina", 
             "outputs": [
@@ -254,10 +234,10 @@
                 "owner": "devteam", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"suppressHeader\": \"\\\"false\\\"\", \"__page__\": 0, \"__rerun_remap_job_id__\": null, \"refGenomeSource\": \"{\\\"genomeSource\\\": \\\"indexed\\\", \\\"index\\\": \\\"hg19\\\", \\\"__current_case__\\\": 0}\", \"singlePaired\": \"{\\\"sInput1\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"sParams\\\": {\\\"sForwardAlign\\\": \\\"forward\\\", \\\"sTrimH\\\": \\\"0\\\", \\\"sTrimL\\\": \\\"0\\\", \\\"sUnmappedFile\\\": \\\"false\\\", \\\"sSettingsType\\\": \\\"full\\\", \\\"sSuppressAlign\\\": \\\"1\\\", \\\"sAlignLimit\\\": \\\"-1\\\", \\\"sMaxFile\\\": \\\"false\\\", \\\"sReverseAlign\\\": \\\"reverse\\\", \\\"__current_case__\\\": 1, \\\"sSkip\\\": \\\"0\\\", \\\"sBestOption\\\": {\\\"sTryHardOption\\\": {\\\"sTryHard\\\": \\\"noTryHard\\\", \\\"__current_case__\\\": 0, \\\"snMaxBacktracks\\\": \\\"125\\\"}, \\\"sBest\\\": \\\"noBest\\\", \\\"__current_case__\\\": 0}, \\\"alignModeOption\\\": {\\\"sMismatchSeed\\\": \\\"2\\\", \\\"sMismatchQual\\\": \\\"70\\\", \\\"sRounding\\\": \\\"round\\\", \\\"__current_case__\\\": 0, \\\"alignMode\\\": \\\"nMode\\\", \\\"sSeedLen\\\": \\\"28\\\"}, \\\"sOffrate\\\": \\\"-1\\\", \\\"sSeed\\\": \\\"0\\\", \\\"sAllValAlignsOption\\\": {\\\"sAllValAligns\\\": \\\"noAllValAligns\\\", \\\"sValAlign\\\": \\\"1\\\", \\\"__current_case__\\\": 0}}, \\\"sPaired\\\": \\\"single\\\", \\\"__current_case__\\\": 0}\"}", 
+            "tool_state": "{\"suppressHeader\": \"\\\"false\\\"\", \"__page__\": 0, \"__rerun_remap_job_id__\": null, \"refGenomeSource\": \"{\\\"genomeSource\\\": \\\"indexed\\\", \\\"index\\\": \\\"hg19\\\", \\\"__current_case__\\\": 0}\", \"singlePaired\": \"{\\\"sInput1\\\": null, \\\"sParams\\\": {\\\"sForwardAlign\\\": \\\"forward\\\", \\\"sTrimH\\\": \\\"0\\\", \\\"sTrimL\\\": \\\"0\\\", \\\"sUnmappedFile\\\": \\\"false\\\", \\\"sSettingsType\\\": \\\"full\\\", \\\"sSuppressAlign\\\": \\\"1\\\", \\\"sAlignLimit\\\": \\\"-1\\\", \\\"sMaxFile\\\": \\\"false\\\", \\\"sReverseAlign\\\": \\\"reverse\\\", \\\"__current_case__\\\": 1, \\\"sSkip\\\": \\\"0\\\", \\\"sBestOption\\\": {\\\"sTryHardOption\\\": {\\\"sTryHard\\\": \\\"noTryHard\\\", \\\"__current_case__\\\": 0, \\\"snMaxBacktracks\\\": \\\"125\\\"}, \\\"sBest\\\": \\\"noBest\\\", \\\"__current_case__\\\": 0}, \\\"alignModeOption\\\": {\\\"sMismatchSeed\\\": \\\"2\\\", \\\"sMismatchQual\\\": \\\"70\\\", \\\"sRounding\\\": \\\"round\\\", \\\"__current_case__\\\": 0, \\\"alignMode\\\": \\\"nMode\\\", \\\"sSeedLen\\\": \\\"28\\\"}, \\\"sOffrate\\\": \\\"-1\\\", \\\"sSeed\\\": \\\"0\\\", \\\"sAllValAlignsOption\\\": {\\\"sAllValAligns\\\": \\\"noAllValAligns\\\", \\\"sValAlign\\\": \\\"1\\\", \\\"__current_case__\\\": 0}}, \\\"sPaired\\\": \\\"single\\\", \\\"__current_case__\\\": 0}\"}", 
             "tool_version": "1.1.3", 
             "type": "tool", 
-            "uuid": "3d32d656-7912-44e6-a632-218286b7f916", 
+            "uuid": "a09286be-e5ba-45fb-be1f-585fe79cf677", 
             "workflow_outputs": []
         }, 
         "6": {
@@ -270,12 +250,7 @@
                     "output_name": "output"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool SAM-to-BAM", 
-                    "name": "source"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "SAM-to-BAM", 
             "outputs": [
@@ -297,10 +272,10 @@
                 "owner": "devteam", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"source\": \"{\\\"index_source\\\": \\\"cached\\\", \\\"index\\\": \\\"hg19\\\", \\\"input1\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"__current_case__\\\": 0}\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", 
+            "tool_state": "{\"source\": \"{\\\"index_source\\\": \\\"cached\\\", \\\"index\\\": \\\"hg19full\\\", \\\"input1\\\": null, \\\"__current_case__\\\": 0}\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", 
             "tool_version": "2.0", 
             "type": "tool", 
-            "uuid": "7181b07a-7d15-4716-ae59-9a1084d445f3", 
+            "uuid": "03872d2a-dde5-4152-a256-04cddf41fec0", 
             "workflow_outputs": []
         }, 
         "7": {
@@ -313,12 +288,7 @@
                     "output_name": "output"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool SAM-to-BAM", 
-                    "name": "source"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "SAM-to-BAM", 
             "outputs": [
@@ -340,14 +310,14 @@
                 "owner": "devteam", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"source\": \"{\\\"index_source\\\": \\\"cached\\\", \\\"index\\\": \\\"hg19\\\", \\\"input1\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"__current_case__\\\": 0}\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", 
+            "tool_state": "{\"source\": \"{\\\"index_source\\\": \\\"cached\\\", \\\"index\\\": \\\"hg19full\\\", \\\"input1\\\": null, \\\"__current_case__\\\": 0}\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", 
             "tool_version": "2.0", 
             "type": "tool", 
-            "uuid": "37977857-377d-4e5f-b256-fae093d920de", 
+            "uuid": "1a747633-c084-433c-8ca5-1f1196e3791f", 
             "workflow_outputs": []
         }, 
         "8": {
-            "annotation": "{\"output_tabular\": {\"name\": \"MACS2_bed\", \"description\": \"\", \"type\": \"tabular\"}, \"output_plot\": {\"name\": \"MACS2_plot\", \"description\": \"\", \"type\": \"pdf\"}}", 
+            "annotation": "{\"output_narrowpeaks\": {\"name\": \"MACS2_bed\", \"description\": \"\", \"type\": \"bed\"}, \"output_plot\": {\"name\": \"MACS2_plot\", \"description\": \"\", \"type\": \"pdf\"}}", 
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_callpeak/2.1.0.20151222.0", 
             "id": 8, 
             "input_connections": {
@@ -360,16 +330,7 @@
                     "output_name": "output1"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool MACS2 callpeak", 
-                    "name": "input_control_file"
-                }, 
-                {
-                    "description": "runtime parameter for tool MACS2 callpeak", 
-                    "name": "input_treatment_file"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "MACS2 callpeak", 
             "outputs": [
@@ -423,10 +384,10 @@
                 "owner": "iuc", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"__page__\": 0, \"effective_genome_size_options\": \"{\\\"effective_genome_size_options_selector\\\": \\\"2451960000\\\", \\\"__current_case__\\\": 0}\", \"bampe\": \"\\\"false\\\"\", \"input_control_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"outputs\": \"[\\\"peaks_tabular\\\", \\\"bdg\\\", \\\"pdf\\\"]\", \"cutoff_options\": \"{\\\"cutoff_options_selector\\\": \\\"qvalue\\\", \\\"qvalue\\\": \\\"0.05\\\", \\\"__current_case__\\\": 1}\", \"advanced_options\": \"{\\\"advanced_options_selector\\\": \\\"off\\\", \\\"__current_case__\\\": 1}\", \"input_treatment_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"nomodel_type\": \"{\\\"nomodel_type_selector\\\": \\\"create_model\\\", \\\"__current_case__\\\": 0}\", \"band_width\": \"\\\"300\\\"\"}", 
+            "tool_state": "{\"__page__\": 0, \"effective_genome_size_options\": \"{\\\"effective_genome_size_options_selector\\\": \\\"2451960000\\\", \\\"__current_case__\\\": 0}\", \"bampe\": \"\\\"false\\\"\", \"input_control_file\": \"null\", \"__rerun_remap_job_id__\": null, \"outputs\": \"[\\\"peaks_tabular\\\", \\\"bdg\\\", \\\"pdf\\\"]\", \"cutoff_options\": \"{\\\"cutoff_options_selector\\\": \\\"qvalue\\\", \\\"qvalue\\\": \\\"0.05\\\", \\\"__current_case__\\\": 1}\", \"advanced_options\": \"{\\\"advanced_options_selector\\\": \\\"off\\\", \\\"__current_case__\\\": 1}\", \"input_treatment_file\": \"null\", \"nomodel_type\": \"{\\\"nomodel_type_selector\\\": \\\"create_model\\\", \\\"__current_case__\\\": 0}\", \"band_width\": \"\\\"300\\\"\"}", 
             "tool_version": "2.1.0.20151222.0", 
             "type": "tool", 
-            "uuid": "7d522e1b-10c7-41d6-8fee-455133c85089", 
+            "uuid": "e8e38d74-1a63-4c58-b042-487838e9edc7", 
             "workflow_outputs": []
         }, 
         "9": {
@@ -443,16 +404,7 @@
                     "output_name": "output_treat_pileup"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool MACS2 bdgcmp", 
-                    "name": "infile_control"
-                }, 
-                {
-                    "description": "runtime parameter for tool MACS2 bdgcmp", 
-                    "name": "infile_treatment"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "MACS2 bdgcmp", 
             "outputs": [
@@ -474,10 +426,10 @@
                 "owner": "iuc", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
-            "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"infile_control\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"bdgcmp_options\": \"{\\\"bdgcmp_options_selector\\\": \\\"ppois\\\", \\\"__current_case__\\\": 3}\", \"infile_treatment\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}", 
+            "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"infile_control\": \"null\", \"bdgcmp_options\": \"{\\\"bdgcmp_options_selector\\\": \\\"ppois\\\", \\\"__current_case__\\\": 3}\", \"infile_treatment\": \"null\"}", 
             "tool_version": "2.1.0.20151222.0", 
             "type": "tool", 
-            "uuid": "dcfd9cac-e8a2-4425-a8fc-1e398710d6ca", 
+            "uuid": "974626f2-7adb-4f71-9db5-7abdff78e5d0", 
             "workflow_outputs": []
         }, 
         "10": {
@@ -490,12 +442,7 @@
                     "output_name": "outfile"
                 }
             }, 
-            "inputs": [
-                {
-                    "description": "runtime parameter for tool Wig/BedGraph-to-bigWig", 
-                    "name": "input1"
-                }
-            ], 
+            "inputs": [], 
             "label": null, 
             "name": "Wig/BedGraph-to-bigWig", 
             "outputs": [
@@ -511,12 +458,12 @@
             "post_job_actions": {}, 
             "tool_errors": null, 
             "tool_id": "wig_to_bigWig", 
-            "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"input1\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"settings\": \"{\\\"settingsType\\\": \\\"preset\\\", \\\"__current_case__\\\": 0}\"}", 
+            "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"input1\": \"null\", \"settings\": \"{\\\"settingsType\\\": \\\"preset\\\", \\\"__current_case__\\\": 0}\"}", 
             "tool_version": "1.1.0", 
             "type": "tool", 
-            "uuid": "f5cf8c55-03d2-4fc0-b5fa-5f4be859b628", 
+            "uuid": "c9d04953-8508-4b6b-bbf3-edcf421eadc8", 
             "workflow_outputs": []
         }
     }, 
-    "uuid": "9d3dbd7d-2fd7-479f-a582-aa2d84a5d443"
+    "uuid": "f9305594-34b1-4189-b59f-9f217a9d9b34"
 }
\ No newline at end of file