Mercurial > repos > takakoron > merge_snpsindels_files

annotate Merge_SNPsInDels_files_docker.xml @ 0:5da57f040f2e default tip

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author takakoron<tm@nig.ac.jp>
date Thu, 24 Mar 2016 17:40:40 +0900
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1 <tool id="Merge_DNA_polymorphism_files_docker" name="Merge_SNPs_/_InDels_data_files">
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2 <description> Merge SNPs / InDels data files </description>
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3 <requirements>
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4 <container type="docker">takakoron/merge_polymorphism_files</container>
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5 </requirements>
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6
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7 <description></description>
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8 <command interpreter="perl">
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9
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10 /usr/src/myapp/merge_polymorphism_files.pl
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11 $input1
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12 $input2
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13 $output1
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14
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15 </command>
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16
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17 <inputs>
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18 <param name="input1" type="data" format="vcf"
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19 label="Select SNPs / InDels data file (format : samtools pileup/mpileup)" />
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20 <param name="input2" type="data" format="vcf"
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21 label="Select SNPs / InDels data file (format : samtools pileup/mpileup)" />
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22 </inputs>
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23
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24 <outputs>
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25 <data name="output1" type="data" format="vcf"/>
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26 </outputs>
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27
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28 <!---
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29 <help>
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30
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31 .. class:: infomark
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32 **About data**
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33
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34 Distribution of chromosome is appeared in order of genome file.
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35
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36 </help>
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37 -->
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38
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39 </tool>
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