Mercurial > repos > tduigou > rptools_rpthermo

changeset 1:9a2fd7c58570 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rptools commit 3542cc86cbb610d0f9411fb74613d19e491f0369
author tduigou
date Tue, 16 May 2023 12:00:45 +0000
parents e9d05fc83186
children b03d10ff2906
files rpthermo.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/rpthermo.xml	Tue Mar 28 12:08:14 2023 +0000
+++ b/rpthermo.xml	Tue May 16 12:00:45 2023 +0000
@@ -12,13 +12,13 @@
     <command detect_errors="exit_code"><![CDATA[
         python -m rptools.rpthermo
         '$input'
-        '$pathway_with_thermo' 
+        '$pathway_with_thermo'
         --pH '$adv.ph'
         --ionic_strength '$adv.ionic_strength'
         --pMg '$adv.pMg'
     ]]></command>
     <environment_variables>
-        <environment_variable name="XDG_CACHE_HOME">\$_GALAXY_JOB_TMP_DIR</environment_variable>
+        <environment_variable name="XDG_CACHE_HOME">\$TMPDIR</environment_variable>
     </environment_variables>
     <inputs>
         <param name="input" type="data" format="sbml" label="SBML Input File" help="Pathways in SBML format" />