Mercurial > repos > testtool > geo_data
comparison GRsetFromGEO/GRsetFromGEO.R @ 28:3d281ad15b83 draft
Uploaded
| author | testtool |
|---|---|
| date | Thu, 13 Apr 2017 11:26:43 -0400 |
| parents | 59122070e61d |
| children | 118e636a5f95 |
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| 27:2d4a97506931 | 28:3d281ad15b83 |
|---|---|
| 6 args <- commandArgs(trailingOnly = TRUE) | 6 args <- commandArgs(trailingOnly = TRUE) |
| 7 GSE = args[1] | 7 GSE = args[1] |
| 8 output = args[2] | 8 output = args[2] |
| 9 | 9 |
| 10 GRset <- getGenomicRatioSetFromGEO(GSE) | 10 GRset <- getGenomicRatioSetFromGEO(GSE) |
| 11 a<-"stefan" | |
| 12 write.table(a,output) | |
| 11 | 13 |
| 12 save(GRset,file = output) | 14 #save(GRset,file = output) |