Mercurial > repos > testtool > geo_data

annotate GRsetFromGEO/GRsetFromGEO.R @ 28:3d281ad15b83 draft

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author testtool
date Thu, 13 Apr 2017 11:26:43 -0400
parents 59122070e61d
children 118e636a5f95
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1 require("minfi", quietly = TRUE)
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3 options(warn = -1)
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4 options("download.file.method"="wget")
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6 args <- commandArgs(trailingOnly = TRUE)
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7 GSE = args[1]
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8 output = args[2]
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10 GRset <- getGenomicRatioSetFromGEO(GSE)
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11 a<-"stefan"
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12 write.table(a,output)
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14 #save(GRset,file = output)