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view GRsetFromGEO/GRsetFromGEO.R @ 55:f84cadc1fdd6 draft

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author testtool
date Tue, 25 Apr 2017 11:03:34 -0400
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require("minfi", quietly = TRUE)

options(warn = -1)
options("download.file.method"="wget")

args <- commandArgs(trailingOnly = TRUE)
GSE = args[1] 
output = args[2] 

GRset <- getGenomicRatioSetFromGEO(GSE)

save(GRset,file = output)