Mercurial > repos > testtool > get_gr_set

annotate GRsetFromGEO/GRsetFromGEO.R @ 38:88d2c717105e draft

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author testtool
date Mon, 24 Jul 2017 10:39:43 -0400
parents ae82fab7c544
children 05f6acc80f47
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1 options(warn = -1)
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2 options('download.file.method.GEOquery' = 'wget')
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3 options('GEOquery.inmemory.gpl'=FALSE)
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6 args <- commandArgs(trailingOnly = TRUE)
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7 input = args[1]
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8 output = args[2]
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9 input <- 'GSE51547'
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10 GRset <- getGenomicRatioSetFromGEO(input)
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12 save(GRset,file = output)
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