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view GRsetFromGEO/GRsetFromGEO.R @ 7:c31140daf71f draft

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author testtool
date Mon, 12 Jun 2017 11:44:26 -0400
parents 7511130b5068
children 5b1a9d86338c
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require("minfi", quietly = TRUE)

options(warn = -1)
options('download.file.method'='curl')

args <- commandArgs(trailingOnly = TRUE)
GSE = args[1] 
output = args[2] 

GRset <- getGenomicRatioSetFromGEO(GSE)

save(GRset,file = output)