Mercurial > repos > testtool > get_gr_set

annotate GRsetFromGEO/GRsetFromGEO.R @ 7:c31140daf71f draft

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author testtool
date Mon, 12 Jun 2017 11:44:26 -0400
parents 7511130b5068
children 5b1a9d86338c
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1 require("minfi", quietly = TRUE)
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3 options(warn = -1)
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4 options('download.file.method'='curl')
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6 args <- commandArgs(trailingOnly = TRUE)
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7 GSE = args[1]
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8 output = args[2]
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10 GRset <- getGenomicRatioSetFromGEO(GSE)
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12 save(GRset,file = output)