Mercurial > repos > triasteran > ribogalaxy_umi_processing
changeset 11:0b5c3e35cddb draft
Uploaded
author | jackcurragh |
---|---|
date | Mon, 25 Jul 2022 11:34:03 +0000 |
parents | d003917eaf2c |
children | 3bd2e8301575 |
files | UMI_riboseq_tool/UMI.py |
diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/UMI_riboseq_tool/UMI.py Fri Jul 15 12:43:45 2022 +0000 +++ b/UMI_riboseq_tool/UMI.py Mon Jul 25 11:34:03 2022 +0000 @@ -69,8 +69,8 @@ pathToFastaFile = argv[1] output = argv[2] bool_gzip = True if argv[3].lower().capitalize() == 'True' else False - UMI_5_prime_length = argv[4] - UMI_3_prime_length = argv[5] + UMI_5_prime_length = int(argv[4]) + UMI_3_prime_length = int(argv[5]) UMI_processing(pathToFastaFile, output, bool_gzip, UMI_5_prime_length, UMI_3_prime_length) if __name__ == "__main__":