Mercurial > repos > triasteran > ribogalaxy_umi_processing
changeset 17:42f195d0ed6d draft
Uploaded
author | triasteran |
---|---|
date | Fri, 30 Sep 2022 09:44:28 +0000 |
parents | cf1a0cbe5c34 |
children | 106ef893af60 |
files | UMI_riboseq_tool/UMI_riboseq.xml |
diffstat | 1 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/UMI_riboseq_tool/UMI_riboseq.xml Fri Sep 30 09:27:53 2022 +0000 +++ b/UMI_riboseq_tool/UMI_riboseq.xml Fri Sep 30 09:44:28 2022 +0000 @@ -1,4 +1,4 @@ -<tool id="UMI_riboseq" name="UMIs to Header" version="0.1.9"> +<tool id="UMI_riboseq" name="UMIs to Header" version="0.1.10"> <requirements> <requirement type="package" version="1.75">biopython</requirement> </requirements> @@ -6,14 +6,14 @@ <![CDATA[ python3 $__tool_directory__/UMI.py $reads $output $gzip ${five_prime_UMI_length} ${three_prime_UMI_length}]]> </command> <inputs> - <param format="fastqsanger,fastqsanger.gz" name="reads" type="data" label="fastqsanger,fastqsanger.gz"/> + <param format="fastq,fastqsanger,fastqsanger.gz" name="reads" type="data" label="fastqsanger,fastqsanger.gz"/> <param name="gzip" type="boolean" truevalue="true" falsevalue="false" checked="True" label="Gzip the outputted FASTQ" /> <param name="five_prime_UMI_length" type="integer" value='2' label="Number of UMI bases at the 5' end" help="2 for McGlincy Ingolia Protocol" /> <param name="three_prime_UMI_length" type="integer" value='5' label="Number of UMI bases at the 3' end)" help="5 for McGlincy Ingolia Protocol" /> </inputs> <outputs> - <data format="fastqsanger,fastqsanger.gz" name="output"/> + <data format="fastq,fastqsanger,fastqsanger.gz" name="output"/> </outputs> <tests> <test>