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author | osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> |
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date | Tue, 11 Mar 2014 12:19:13 -0700 |
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<tool id="raxify_fasta" name="Raxify_FASTA" version="1.0"> <description>Alters FASTA headers for more consistent use in FASTA2PHYLIPe for RAxML</description> <command interpreter="perl"> raxify_fasta.pl $infile $outfile </command> <inputs> <param name="infile" type="data" format="fasta" label="Input File" help="FASTA file to convert" /> </inputs> <outputs> <data format="fasta" name="outfile" label="${tool.name} on ${on_string}: Out file" /> </outputs> <help> **What it does** Truncates FASTA header to 50 characters then replaces spaces, pipes and periods with underscores. ------ **Inputs** FASTA ------ **Outputs** PHYLIP extended ------ **Additional Information** Please direct questions or comments to ucsb_phylogenetics@lifesci.ucsb.edu or, if you can, enter them on the osiris_phylogenetics site at bitbucket.org ------ **Citations** This tool is part of the Osiris Phylogenetics Tool Package for Galaxy. If you make extensive use of this tool in a publication, please consider citing the following. Current Osiris Citation is here http://osiris-phylogenetics.blogspot.com/2012/10/citation.html </help> </tool>