comparison omero_roi_import.xml @ 1:e957793051a8 draft

planemo upload for repository https://github.com/Helmholtz-UFZ/galaxy-tools/tree/main/tools/omero commit a86e6a3189535d12ade221ffbeeaa9d04ad39583

0:9051b91545f6

<tool id="omero_roi_import" name="OMERO ROI Import" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"
      profile="20.01" license="MIT">
    <description> with ezomero </description>
    <macros>
        <token name="@TOOL_VERSION@">5.18.0</token>
        <token name="@VERSION_SUFFIX@">1</token>
    </macros>
    <xrefs>
        <xref type="bio.tools">omero</xref>
    </xrefs>
    <requirements>

        --port $omero_port  
        --log_file '$log'  
    ]]></command>
    <inputs>
        <param argument="input" type="data" format="tabular" optional="false" label="Tab File with ROIs" help="Select ROIs Tabular file"/>
        <param argument="id" type="integer" optional="false" label="Image ID where annotate the ROIs"/>
        <param name="omero_host" type="text" label="OMERO host URL">
            <validator type="regex" message="Enter a valid host location, for example, your.omero.server">^[a-zA-Z0-9._-]*$</validator>
            <validator type="expression" message="No two dots (..) allowed">'..' not in value</validator>
        </param>
        <param argument="omero_port" type="integer" optional="false" value="4064" label="OMERO port"/>

1:e957793051a8

<tool id="omero_roi_import" name="OMERO ROI Import" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"
      profile="20.01" license="MIT">
    <description> with ezomero </description>
    <macros>
        <token name="@TOOL_VERSION@">5.18.0</token>
        <token name="@VERSION_SUFFIX@">2</token>
    </macros>
    <xrefs>
        <xref type="bio.tools">omero</xref>
    </xrefs>
    <requirements>

        --port $omero_port  
        --log_file '$log'  
    ]]></command>
    <inputs>
        <param argument="input" type="data" format="tabular" optional="false" label="Tab File with ROIs" help="Select ROIs Tabular file"/>
        <param argument="id" type="integer" value="" optional="false" label="Image ID where annotate the ROIs"/>
        <param name="omero_host" type="text" label="OMERO host URL">
            <validator type="regex" message="Enter a valid host location, for example, your.omero.server">^[a-zA-Z0-9._-]*$</validator>
            <validator type="expression" message="No two dots (..) allowed">'..' not in value</validator>
        </param>
        <param argument="omero_port" type="integer" optional="false" value="4064" label="OMERO port"/>