annotate test-data/checkv_quality_summary/NC_000913.fasta.tabular @ 0:315c2ed31af1 draft

planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a

contig_id	contig_length	provirus	proviral_length	gene_count	viral_genes	host_genes	checkv_quality	miuvig_quality	completeness	completeness_method	contamination	kmer_freq	warnings
NC_000913.3|provirus_563848_584430	20583	Yes	9846	32	13	6	Low-quality	Genome-fragment	16.3	HMM-based (lower-bound)	52.16	1.0	low-confidence Provirus
NC_000913.3|provirus_1196867_1213107	16241	No	NA	24	9	2	Low-quality	Genome-fragment	42.32	AAI-based (high-confidence)	0.0	1.0	
NC_000913.3|provirus_1412000_1434224	22225	No	NA	27	13	1	Low-quality	Genome-fragment	34.35	HMM-based (lower-bound)	0.0	1.0	
NC_000913.3|provirus_1627517_1653915	26399	Yes	17700	41	10	9	Low-quality	Genome-fragment	36.3	AAI-based (high-confidence)	32.95	1.0	low-confidence Provirus
NC_000913.3|provirus_2461306_2476510	15205	No	NA	20	12	1	Low-quality	Genome-fragment	30.84	AAI-based (high-confidence)	0.0	1.0