Mercurial > repos > ufz > phi_toolkit_report

annotate test-data/checkv_quality_summary/NC_018515.fasta.tabular @ 0:315c2ed31af1 draft

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
author ufz
date Wed, 04 Jun 2025 17:36:40 +0000
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315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
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1 contig_id contig_length provirus proviral_length gene_count viral_genes host_genes checkv_quality miuvig_quality completeness completeness_method contamination kmer_freq warnings
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
2 NC_018515.1|provirus_3418112_3436097 17986 No NA 25 18 2 Low-quality Genome-fragment 37.3 AAI-based (medium-confidence) 0.0 1.0
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
3 NC_018515.1|provirus_4659544_4694673 35130 No NA 49 20 0 Medium-quality Genome-fragment 66.0 HMM-based (lower-bound) 0.0 1.0