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annotate test-data/checkv_quality_summary/NC_018515.fasta.tabular @ 1:3a7f73d638ba draft default tip

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 368e8a7322c9763c648637263d4695abc146be13
author ufz
date Tue, 22 Jul 2025 11:09:24 +0000
parents 315c2ed31af1
children
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315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
1 contig_id contig_length provirus proviral_length gene_count viral_genes host_genes checkv_quality miuvig_quality completeness completeness_method contamination kmer_freq warnings
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
2 NC_018515.1|provirus_3418112_3436097 17986 No NA 25 18 2 Low-quality Genome-fragment 37.3 AAI-based (medium-confidence) 0.0 1.0
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
3 NC_018515.1|provirus_4659544_4694673 35130 No NA 49 20 0 Medium-quality Genome-fragment 66.0 HMM-based (lower-bound) 0.0 1.0