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view test-data/checkv_quality_summary/NC_014364.fasta.tabular @ 1:3a7f73d638ba draft default tip

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 368e8a7322c9763c648637263d4695abc146be13
author ufz
date Tue, 22 Jul 2025 11:09:24 +0000
parents 315c2ed31af1
children
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contig_id	contig_length	provirus	proviral_length	gene_count	viral_genes	host_genes	checkv_quality	miuvig_quality	completeness	completeness_method	contamination	kmer_freq	warnings
NC_014364.1|provirus_2121424_2157334	35911	Yes	29611	44	12	3	Medium-quality	Genome-fragment	63.36	AAI-based (medium-confidence)	17.54	1.0	
NC_014364.1|provirus_2329685_2350621	20937	No	NA	29	6	1	Low-quality	Genome-fragment	22.17	HMM-based (lower-bound)	0.0	1.01	
NC_014364.1|provirus_2666253_2703772	37520	No	NA	56	15	0	Medium-quality	Genome-fragment	73.62	AAI-based (high-confidence)	0.0	1.0	
NC_014364.1|provirus_2976748_3014759	38012	No	NA	44	12	0	Medium-quality	Genome-fragment	69.42	HMM-based (lower-bound)	0.0	1.0