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view test-data/checkv_quality_summary/NC_019936.fasta.tabular @ 1:3a7f73d638ba draft default tip

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 368e8a7322c9763c648637263d4695abc146be13
author ufz
date Tue, 22 Jul 2025 11:09:24 +0000
parents 315c2ed31af1
children
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contig_id	contig_length	provirus	proviral_length	gene_count	viral_genes	host_genes	checkv_quality	miuvig_quality	completeness	completeness_method	contamination	kmer_freq	warnings
NC_019936.1|provirus_2347508_2361929	14422	No	NA	24	2	0	High-quality	High-quality	100.0	AAI-based (high-confidence)	0.0	1.93	high kmer_freq may indicate large duplication; contig >1.5x longer than expected genome length
NC_019936.1|provirus_3233292_3242961	9670	No	NA	14	2	0	High-quality	High-quality	100.0	AAI-based (high-confidence)	0.0	1.0	
NC_019936.1|provirus_4295725_4304306	8582	No	NA	13	2	0	High-quality	High-quality	100.0	AAI-based (medium-confidence)	0.0	1.0