Mercurial > repos > ufz > virsorter_build_database
annotate data_manager_conf.xml @ 0:863ba94fb6e4 draft
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
author | ufz |
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date | Sun, 23 Jun 2024 16:48:31 +0000 |
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children | c456ae8354f2 |
rev | line source |
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863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
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changeset
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1 <data_managers> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
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changeset
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2 <data_manager tool_file="data_manager/virsorter_datamanager.xml" id="virsorter_build_database"> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
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changeset
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3 <data_table name="virsorter"> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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4 <output> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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5 <column name="value"/> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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6 <column name="name"/> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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7 <column name="virsorter_version"/> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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8 <column name="path" output_ref="out_file"> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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9 <move type="directory"> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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10 <source>${path}</source> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">virsorter/${path}</target> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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12 </move> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/virsorter/${path}</value_translation> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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14 <value_translation type="function">abspath</value_translation> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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15 </column> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
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changeset
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16 </output> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
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changeset
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17 </data_table> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
diff
changeset
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18 </data_manager> |
863ba94fb6e4
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
parents:
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changeset
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19 </data_managers> |