annotate data_manager_conf.xml @ 1:ad63dbb3493a draft

planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit c78bd5eafa3d9450305cc8b32ba9cf8c64c42ba7
author ufz
date Mon, 18 Nov 2024 15:26:28 +0000
parents 863ba94fb6e4
children c456ae8354f2
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863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
ufz
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1 <data_managers>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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2 <data_manager tool_file="data_manager/virsorter_datamanager.xml" id="virsorter_build_database">
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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3 <data_table name="virsorter">
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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4 <output>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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5 <column name="value"/>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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6 <column name="name"/>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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7 <column name="virsorter_version"/>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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8 <column name="path" output_ref="out_file">
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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9 <move type="directory">
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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10 <source>${path}</source>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">virsorter/${path}</target>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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12 </move>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/virsorter/${path}</value_translation>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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14 <value_translation type="function">abspath</value_translation>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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15 </column>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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16 </output>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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17 </data_table>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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18 </data_manager>
863ba94fb6e4 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
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19 </data_managers>