changeset 1:95efdc025a48 draft

Uploaded
author urgi-team
date Thu, 12 Nov 2015 07:40:16 -0500
parents 780ad1e582e1
children cfc5177134ce
files Galaxy-Workflow-creation_workflow_gandalf_2.0.ga Galaxy-Workflow-workflow_gandalf_1.0.ga repository_dependencies.xml
diffstat 3 files changed, 321 insertions(+), 385 deletions(-) [+]
line wrap: on
line diff
--- a/Galaxy-Workflow-creation_workflow_gandalf_2.0.ga	Thu Nov 12 07:38:20 2015 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,384 +0,0 @@
-{
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-    "annotation": "", 
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-            "inputs": [
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\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Galaxy-Workflow-workflow_gandalf_1.0.ga	Thu Nov 12 07:40:16 2015 -0500
@@ -0,0 +1,320 @@
+{
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+            "tool_state": "{\"name\": \"Input Dataset\"}", 
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+            "id": 1, 
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+            "inputs": [
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+                    "description": "", 
+                    "name": "Input Dataset"
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+            "name": "Input dataset", 
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+                "top": 320
+            }, 
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+            "tool_state": "{\"name\": \"Input Dataset\"}", 
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+            "id": 2, 
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+            "tool_version": "0.4.1", 
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+            "tool_id": "samtools_flagstat", 
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+            "tool_version": "1.0.0", 
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+            "user_outputs": []
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+            "id": 8, 
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+            }, 
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+            "name": "VCFFiltering", 
+            "outputs": [
+                {
+                    "name": "outputVCF", 
+                    "type": "vcf"
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+                    "name": "output_html", 
+                    "type": "html"
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+                "top": 180
+            }, 
+            "post_job_actions": {
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+                }
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+        }
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+    "uuid": "1a7a40af-5624-4049-a1dd-fee31e8731ee"
+}
\ No newline at end of file
--- a/repository_dependencies.xml	Thu Nov 12 07:38:20 2015 -0500
+++ b/repository_dependencies.xml	Thu Nov 12 07:40:16 2015 -0500
@@ -5,5 +5,5 @@
     <repository changeset_revision="379fdf4c41ac" name="picard" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
     <repository changeset_revision="874dd6c0fcde" name="freebayes4workflow" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" />
     <repository changeset_revision="3552a8d9f51c" name="vcfgandalftools" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" />
-    <repository changeset_revision="af65bfb54977" name="suite_samtools_1_19" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+    <repository changeset_revision="af65bfb54977" name="suite_samtools_0_1_19" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
 </repositories>