comparison tool_dependencies.xml @ 0:3552a8d9f51c draft

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0:3552a8d9f51c

<?xml version="1.0"?>
<tool_dependency>
	<package name="VCF_Gandalf_Tools" version="1.0">
		<install version="1.0">
			<actions>
				<action type="download_by_url">http://10.0.0.108/VCFtools-1.2.tar.gz</action>
				<action type="shell_command">python setup_VCFtools.py install</action>
				<action type="move_directory_files">
					<source_directory>.</source_directory>
					<destination_directory>$INSTALL_DIR</destination_directory>
				</action>
				<action type="set_environment">
					<environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR</environment_variable>
					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
				</action>
			</actions>
		</install>
	</package>
</tool_dependency>