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annotate run_ribocount_sample.sh @ 7:096c6bbf4a04

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Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
author Vimalkumar Velayudhan <vimal@biotechcoder.com>
date Thu, 13 Aug 2015 15:03:20 +0100
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096c6bbf4a04 Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
diff changeset
1 #!/bin/bash
096c6bbf4a04 Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
diff changeset
2 python riboplot/ribocount.py -b tests/data/5hRPFsorted.bam \
096c6bbf4a04 Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
diff changeset
3 -f tests/data/zebrafish.fna
096c6bbf4a04 Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
diff changeset
4