Mercurial > repos > vimalkumarvelayudhan > riboplot
comparison riboplot.xml @ 19:6e3b13906b54
Use packages from the test toolshed. Add bedtools dependency
| author | Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com> |
|---|---|
| date | Fri, 28 Aug 2015 11:07:26 +0100 |
| parents | 844eb8c36f32 |
| children | a013fc01d8f3 |
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| 16:ef39290c19af | 19:6e3b13906b54 |
|---|---|
| 2 <description>Plot and output read counts for a single transcript in an alignment (BAM) | 2 <description>Plot and output read counts for a single transcript in an alignment (BAM) |
| 3 </description> | 3 </description> |
| 4 <requirements> | 4 <requirements> |
| 5 <requirement type="package" version="1.2.1">matplotlib</requirement> | 5 <requirement type="package" version="1.2.1">matplotlib</requirement> |
| 6 <requirement type="package" version="0.8.3">pysam</requirement> | 6 <requirement type="package" version="0.8.3">pysam</requirement> |
| 7 <requirement type="package" version="2.18">bedtools</requirement> | |
| 7 </requirements> | 8 </requirements> |
| 8 <stdio> | 9 <stdio> |
| 9 <exit_code range="1:" level="fatal" description="Error" /> | 10 <exit_code range="1:" level="fatal" description="Error" /> |
| 10 </stdio> | 11 </stdio> |
| 11 <command interpreter="python">riboplot/riboplot.py | 12 <command interpreter="python">riboplot/riboplot.py |