comparison tool_dependencies.xml @ 27:99dda3e39997

Attempt 4 using virtualenv
author Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com>
date Wed, 02 Sep 2015 12:23:20 +0100
parents 4b1254319802
children fb64b970da25
comparison
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26:4b1254319802 27:99dda3e39997
3 <package name="riboplot" version="0.1.0"> 3 <package name="riboplot" version="0.1.0">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="setup_virtualenv">riboplot==0.1.0</action> 6 <action type="setup_virtualenv">riboplot==0.1.0</action>
7 <action type="set_environment"> 7 <action type="set_environment">
8 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> 8 <environment_variable action="set_to" name="RIBOPLOT_PATH">$INSTALL_DIR/venv/bin</environment_variable>
9 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
10 <environment_variable action="set_to" name="RIBOPLOT_PATH">$INSTALL_DIR/bin</environment_variable>
11 </action> 9 </action>
12 </actions> 10 </actions>
13 </install> 11 </install>
14 <readme> 12 <readme>
15 Note: RNA coverage requires bedtools installed. 13 Note: RNA coverage requires bedtools installed.