Mercurial > repos > vimalkumarvelayudhan > riboplot
view docs/readme.rst @ 12:61c47a1d6a7a
Add a test to check if a valid FASTA file is used (ribocount)
author | Vimalkumar Velayudhan <vimal@biotechcoder.com> |
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date | Wed, 19 Aug 2015 11:11:37 +0100 |
parents | 8964641b04ef |
children | 628f82e72d72 |
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=============================== RiboPlot =============================== .. image:: https://img.shields.io/travis/vimalkumarvelayudhan/riboplot.svg :target: https://travis-ci.org/vimalkumarvelayudhan/riboplot .. image:: https://img.shields.io/pypi/v/riboplot.svg :target: https://pypi.python.org/pypi/riboplot RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format). There are two programs in the package: **riboplot** Plot and output read counts (csv) for a single transcript. **ribocount** Output read counts for all transcripts in an alignment. For help on using these programs, please refer to :ref:`usage`. Free software: BSD license. Documentation: https://riboplot.readthedocs.org.