annotate deseq-hts_2.0/bin/deseq2_config.sh @ 10:2fe512c7bfdf draft

DESeq2 version 1.0.19 added to the repo
author vipints <vipin@cbio.mskcc.org>
date Tue, 08 Oct 2013 08:15:34 -0400
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2fe512c7bfdf DESeq2 version 1.0.19 added to the repo
vipints <vipin@cbio.mskcc.org>
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1 #!/bin/bash
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vipints <vipin@cbio.mskcc.org>
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2 export DESEQ2_VERSION=1.0.19
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vipints <vipin@cbio.mskcc.org>
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3 export DESEQ2_PATH=
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vipints <vipin@cbio.mskcc.org>
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4 export DESEQ2_SRC_PATH=$DESEQ2_PATH/src
2fe512c7bfdf DESeq2 version 1.0.19 added to the repo
vipints <vipin@cbio.mskcc.org>
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5 export DESEQ2_BIN_PATH=$DESEQ2_PATH/bin
2fe512c7bfdf DESeq2 version 1.0.19 added to the repo
vipints <vipin@cbio.mskcc.org>
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6 export INTERPRETER=
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7 export MATLAB_BIN_PATH=
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vipints <vipin@cbio.mskcc.org>
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8 export MATLAB_MEX_PATH=
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vipints <vipin@cbio.mskcc.org>
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9 export MATLAB_INCLUDE_DIR=
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10 export OCTAVE_BIN_PATH=
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11 export OCTAVE_MKOCT=
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vipints <vipin@cbio.mskcc.org>
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12 export SAMTOOLS_DIR=
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13 export PYTHON_PATH=/usr/bin/python
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14 export SCIPY_PATH=
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15 export R_PATH=
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16 export LD_LIBRARY_PATH=
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vipints <vipin@cbio.mskcc.org>
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17 export ENVIRONMENT=galaxy
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