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annotate dexseq-hts_1.0/bin/dexseq_config.sh.sample @ 11:cec4b4fb30be draft default tip

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DEXSeq version 1.6 added
author vipints <vipin@cbio.mskcc.org>
date Tue, 08 Oct 2013 08:22:45 -0400
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cec4b4fb30be DEXSeq version 1.6 added
vipints <vipin@cbio.mskcc.org>
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1 #!/bin/bash
cec4b4fb30be DEXSeq version 1.6 added
vipints <vipin@cbio.mskcc.org>
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2 export DEXSEQ_VERSION=1.6.0
cec4b4fb30be DEXSeq version 1.6 added
vipints <vipin@cbio.mskcc.org>
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3 export SAMTOOLS_DIR=/home/vipin/samtools-0.18-beta
cec4b4fb30be DEXSeq version 1.6 added
vipints <vipin@cbio.mskcc.org>
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4 export PYTHON_PATH=/usr/bin/python
cec4b4fb30be DEXSeq version 1.6 added
vipints <vipin@cbio.mskcc.org>
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5 export PYTHONPATH=/home/vipin/lib/python2.7/site-packages/:$PYTHONPATH
cec4b4fb30be DEXSeq version 1.6 added
vipints <vipin@cbio.mskcc.org>
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6 export R_PATH=/home/vipin/bin/R