fml_gff3togtf: GFFtools-GX annotate

author	vipints
date	Tue, 10 Jun 2014 19:57:56 -0400
parents
children

rev	line source
1 c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	1
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	2
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	3
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	4
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	5
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	9 <meta charset='utf-8'>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	11
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	12
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	13 <title>vipints/GFFtools-GX · GitHub</title>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	14 <link rel="search" type="application/opensearchdescription+xml" href="/opensearch.xml" title="GitHub" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	15 <link rel="fluid-icon" href="https://github.com/fluidicon.png" title="GitHub" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	16 <link rel="apple-touch-icon" sizes="57x57" href="/apple-touch-icon-114.png" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	17 <link rel="apple-touch-icon" sizes="114x114" href="/apple-touch-icon-114.png" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	18 <link rel="apple-touch-icon" sizes="72x72" href="/apple-touch-icon-144.png" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	19 <link rel="apple-touch-icon" sizes="144x144" href="/apple-touch-icon-144.png" />
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	21
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	24
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	27
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	28
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	33
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	35
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	36
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	37
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	38
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	39 <link rel="icon" type="image/x-icon" href="https://assets-cdn.github.com/favicon.ico" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	40
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	41
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	42 <meta content="authenticity_token" name="csrf-param" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	43 <meta content="8RFayg0epQkPCssjmCYy7wh4dPucfoF71qZu96AGi6wPKKHwIkpQgMBnz5kb6Q/LmWGaXKr5cfsR3UrgWGhQjA==" name="csrf-token" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	44
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	45 <link href="https://assets-cdn.github.com/assets/github-2a5fe476db9a69ca883f024853575d588b2bd187.css" media="all" rel="stylesheet" type="text/css" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	46 <link href="https://assets-cdn.github.com/assets/github2-a1fd2161b2d8ea3aef1c3d15c79772ff80eb5523.css" media="all" rel="stylesheet" type="text/css" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	47
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	48
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	49
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	50 <meta http-equiv="x-pjax-version" content="cc9167eb91e25e1e59deba1003934246">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	51
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	52
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	53 <meta name="description" content="GFFtools-GX - gfftools - Galaxy toolshed repository" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	54
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	56 <link href="https://github.com/vipints/GFFtools-GX/commits/master.atom" rel="alternate" title="Recent Commits to GFFtools-GX:master" type="application/atom+xml" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	57
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	58 </head>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	59
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	60
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	61 <body class="logged_out env-production vis-public">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	62 <a href="#start-of-content" tabindex="1" class="accessibility-aid js-skip-to-content">Skip to content</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	63 <div class="wrapper">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	64
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	65
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	66
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	67
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	68
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	69
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	70
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	71 <div class="header header-logged-out">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	72 <div class="container clearfix">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	73
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	74 <a class="header-logo-wordmark" href="https://github.com/">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	75 <span class="mega-octicon octicon-logo-github"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	76 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	77
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	78 <div class="header-actions">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	79 <a class="button primary" href="/join">Sign up</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	80 <a class="button signin" href="/login?return_to=%2Fvipints%2FGFFtools-GX">Sign in</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	81 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	82
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	83 <div class="command-bar js-command-bar in-repository">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	84
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	85 <ul class="top-nav">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	86 <li class="explore"><a href="/explore">Explore</a></li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	87 <li class="features"><a href="/features">Features</a></li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	88 <li class="enterprise"><a href="https://enterprise.github.com/">Enterprise</a></li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	89 <li class="blog"><a href="/blog">Blog</a></li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	90 </ul>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	91 <form accept-charset="UTF-8" action="/search" class="command-bar-form" id="top_search_form" method="get">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	92
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	93 <div class="commandbar">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	94 <span class="message"></span>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	96
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	97
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	98 data-repo="vipints/GFFtools-GX"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	99 data-branch="master"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	100 data-sha="e5e5e35ebe8bd3ee7600b6208431582926419975"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	101 >
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	102 <div class="display hidden"></div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	103 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	104
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	105 <input type="hidden" name="nwo" value="vipints/GFFtools-GX" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	106
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	109 <span class="js-select-button">This repository</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	110 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	111
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	113 <div class="select-menu-modal">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	114
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	115 <div class="select-menu-item js-navigation-item js-this-repository-navigation-item selected">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	116 <span class="select-menu-item-icon octicon octicon-check"></span>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	118 <div class="select-menu-item-text js-select-button-text">This repository</div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	119 </div> <!-- /.select-menu-item -->
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	120
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	121 <div class="select-menu-item js-navigation-item js-all-repositories-navigation-item">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	122 <span class="select-menu-item-icon octicon octicon-check"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	123 <input type="radio" name="search_target" value="global" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	124 <div class="select-menu-item-text js-select-button-text">All repositories</div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	125 </div> <!-- /.select-menu-item -->
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	126
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	127 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	128 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	129 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	130
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	131 <span class="help tooltipped tooltipped-s" aria-label="Show command bar help">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	132 <span class="octicon octicon-question"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	133 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	134
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	135
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	136 <input type="hidden" name="ref" value="cmdform">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	137
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	138 </form>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	139 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	140
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	141 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	142 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	143
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	144
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	145
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	146 <div id="start-of-content" class="accessibility-aid"></div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	147 <div class="site" itemscope itemtype="http://schema.org/WebPage">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	148 <div id="js-flash-container">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	149
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	150 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	151 <div class="pagehead repohead instapaper_ignore readability-menu">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	152 <div class="container">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	153
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	154
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	155 <ul class="pagehead-actions">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	156
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	157
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	158 <li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	159 <a href="/login?return_to=%2Fvipints%2FGFFtools-GX"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	160 class="minibutton with-count star-button tooltipped tooltipped-n"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	161 aria-label="You must be signed in to star a repository" rel="nofollow">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	162 <span class="octicon octicon-star"></span>Star
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	163 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	164
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	165 <a class="social-count js-social-count" href="/vipints/GFFtools-GX/stargazers">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	166 0
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	167 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	168
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	169 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	170
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	171 <li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	172 <a href="/login?return_to=%2Fvipints%2FGFFtools-GX"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	173 class="minibutton with-count js-toggler-target fork-button tooltipped tooltipped-n"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	174 aria-label="You must be signed in to fork a repository" rel="nofollow">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	175 <span class="octicon octicon-repo-forked"></span>Fork
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	176 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	177 <a href="/vipints/GFFtools-GX/network" class="social-count">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	178 0
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	179 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	180 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	181 </ul>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	182
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	183 <h1 itemscope itemtype="http://data-vocabulary.org/Breadcrumb" class="entry-title public">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	184 <span class="repo-label"><span>public</span></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	185 <span class="mega-octicon octicon-repo"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	186 <span class="author"><a href="/vipints" class="url fn" itemprop="url" rel="author"><span itemprop="title">vipints</span></a></span><!--
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	187 --><span class="path-divider">/</span><!--
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	188 --><strong><a href="/vipints/GFFtools-GX" class="js-current-repository js-repo-home-link">GFFtools-GX</a></strong>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	189
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	190 <span class="page-context-loader">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	191 <img alt="" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	192 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	193
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	194 </h1>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	195 </div><!-- /.container -->
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	196 </div><!-- /.repohead -->
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	197
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	198 <div class="container">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	199 <div class="repository-with-sidebar repo-container new-discussion-timeline js-new-discussion-timeline with-full-navigation ">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	200 <div class="repository-sidebar clearfix">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	201
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	202
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	203 <div class="sunken-menu vertical-right repo-nav js-repo-nav js-repository-container-pjax js-octicon-loaders">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	204 <div class="sunken-menu-contents">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	205 <ul class="sunken-menu-group">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	206 <li class="tooltipped tooltipped-w" aria-label="Code">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	207 <a href="/vipints/GFFtools-GX" aria-label="Code" class="selected js-selected-navigation-item sunken-menu-item" data-hotkey="g c" data-pjax="true" data-selected-links="repo_source repo_downloads repo_commits repo_releases repo_tags repo_branches /vipints/GFFtools-GX">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	208 <span class="octicon octicon-code"></span> <span class="full-word">Code</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	209 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	210 </a> </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	211
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	212 <li class="tooltipped tooltipped-w" aria-label="Issues">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	213 <a href="/vipints/GFFtools-GX/issues" aria-label="Issues" class="js-selected-navigation-item sunken-menu-item js-disable-pjax" data-hotkey="g i" data-selected-links="repo_issues /vipints/GFFtools-GX/issues">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	214 <span class="octicon octicon-issue-opened"></span> <span class="full-word">Issues</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	215 <span class='counter'>0</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	216 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	217 </a> </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	218
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	219 <li class="tooltipped tooltipped-w" aria-label="Pull Requests">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	220 <a href="/vipints/GFFtools-GX/pulls" aria-label="Pull Requests" class="js-selected-navigation-item sunken-menu-item js-disable-pjax" data-hotkey="g p" data-selected-links="repo_pulls /vipints/GFFtools-GX/pulls">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	221 <span class="octicon octicon-git-pull-request"></span> <span class="full-word">Pull Requests</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	222 <span class='counter'>0</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	223 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	224 </a> </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	225
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	226
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	227 </ul>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	228 <div class="sunken-menu-separator"></div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	229 <ul class="sunken-menu-group">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	230
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	231 <li class="tooltipped tooltipped-w" aria-label="Pulse">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	232 <a href="/vipints/GFFtools-GX/pulse" aria-label="Pulse" class="js-selected-navigation-item sunken-menu-item" data-pjax="true" data-selected-links="pulse /vipints/GFFtools-GX/pulse">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	233 <span class="octicon octicon-pulse"></span> <span class="full-word">Pulse</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	234 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	235 </a> </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	236
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	237 <li class="tooltipped tooltipped-w" aria-label="Graphs">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	238 <a href="/vipints/GFFtools-GX/graphs" aria-label="Graphs" class="js-selected-navigation-item sunken-menu-item" data-pjax="true" data-selected-links="repo_graphs repo_contributors /vipints/GFFtools-GX/graphs">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	239 <span class="octicon octicon-graph"></span> <span class="full-word">Graphs</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	240 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	241 </a> </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	242
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	243 <li class="tooltipped tooltipped-w" aria-label="Network">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	244 <a href="/vipints/GFFtools-GX/network" aria-label="Network" class="js-selected-navigation-item sunken-menu-item js-disable-pjax" data-selected-links="repo_network /vipints/GFFtools-GX/network">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	245 <span class="octicon octicon-repo-forked"></span> <span class="full-word">Network</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	246 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	247 </a> </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	248 </ul>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	249
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	250
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	251 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	252 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	253
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	254 <div class="only-with-full-nav">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	255
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	256
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	257
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	258
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	259 <div class="clone-url open"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	260 data-protocol-type="http"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	261 data-url="/users/set_protocol?protocol_selector=http&protocol_type=clone">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	262 <h3><strong>HTTPS</strong> clone URL</h3>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	263 <div class="clone-url-box">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	264 <input type="text" class="clone js-url-field"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	265 value="https://github.com/vipints/GFFtools-GX.git" readonly="readonly">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	266 <span class="url-box-clippy">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	267 <button aria-label="copy to clipboard" class="js-zeroclipboard minibutton zeroclipboard-button" data-clipboard-text="https://github.com/vipints/GFFtools-GX.git" data-copied-hint="copied!" type="button"><span class="octicon octicon-clippy"></span></button>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	268 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	269 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	270 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	271
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	272
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	273
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	274 <div class="clone-url "
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	275 data-protocol-type="subversion"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	276 data-url="/users/set_protocol?protocol_selector=subversion&protocol_type=clone">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	277 <h3><strong>Subversion</strong> checkout URL</h3>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	278 <div class="clone-url-box">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	279 <input type="text" class="clone js-url-field"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	280 value="https://github.com/vipints/GFFtools-GX" readonly="readonly">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	281 <span class="url-box-clippy">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	282 <button aria-label="copy to clipboard" class="js-zeroclipboard minibutton zeroclipboard-button" data-clipboard-text="https://github.com/vipints/GFFtools-GX" data-copied-hint="copied!" type="button"><span class="octicon octicon-clippy"></span></button>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	283 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	284 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	285 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	286
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	287
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	288 <p class="clone-options">You can clone with
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	289 <a href="#" class="js-clone-selector" data-protocol="http">HTTPS</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	290 or <a href="#" class="js-clone-selector" data-protocol="subversion">Subversion</a>.
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	291 <span class="help tooltipped tooltipped-n" aria-label="Get help on which URL is right for you.">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	292 <a href="https://help.github.com/articles/which-remote-url-should-i-use">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	293 <span class="octicon octicon-question"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	294 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	295 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	296 </p>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	297
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	298
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	299
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	300 <a href="/vipints/GFFtools-GX/archive/master.zip"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	301 class="minibutton sidebar-button"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	302 aria-label="Download vipints/GFFtools-GX as a zip file"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	303 title="Download vipints/GFFtools-GX as a zip file"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	304 rel="nofollow">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	305 <span class="octicon octicon-cloud-download"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	306 Download ZIP
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	307 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	308 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	309 </div><!-- /.repository-sidebar -->
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	310
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	311 <div id="js-repo-pjax-container" class="repository-content context-loader-container" data-pjax-container>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	312
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	313
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	314 <span id="js-show-full-navigation"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	315
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	316 <div class="repository-meta js-details-container ">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	317 <div class="repository-description js-details-show">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	318 <p>gfftools - Galaxy toolshed repository</p>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	319 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	320
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	321
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	322
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	323 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	324
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	325 <div class="capped-box overall-summary ">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	326
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	327 <div class="stats-switcher-viewport js-stats-switcher-viewport">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	328 <div class="stats-switcher-wrapper">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	329 <ul class="numbers-summary">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	330 <li class="commits">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	331 <a data-pjax href="/vipints/GFFtools-GX/commits/master">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	332 <span class="num">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	333 <span class="octicon octicon-history"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	334 38
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	335 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	336 commits
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	337 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	338 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	339 <li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	340 <a data-pjax href="/vipints/GFFtools-GX/branches">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	341 <span class="num">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	342 <span class="octicon octicon-git-branch"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	343 1
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	344 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	345 branch
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	346 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	347 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	348
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	349 <li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	350 <a data-pjax href="/vipints/GFFtools-GX/releases">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	351 <span class="num">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	352 <span class="octicon octicon-tag"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	353 0
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	354 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	355 releases
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	356 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	357 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	358
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	359 <li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	360
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	361 <a href="/vipints/GFFtools-GX/graphs/contributors">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	362 <span class="num">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	363 <span class="octicon octicon-organization"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	364 1
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	365 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	366 contributor
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	367 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	368 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	369 </ul>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	370
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	371 <div class="repository-lang-stats">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	372 <ol class="repository-lang-stats-numbers">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	373 <li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	374 <a href="/vipints/GFFtools-GX/search?l=python">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	375 <span class="color-block language-color" style="background-color:#3581ba;"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	376 <span class="lang">Python</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	377 <span class="percent">100%</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	378 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	379 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	380 </ol>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	381 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	382 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	383 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	384
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	385 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	386
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	387 <div class="tooltipped tooltipped-s" aria-label="Show language statistics">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	388 <a href="#"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	389 class="repository-lang-stats-graph js-toggle-lang-stats"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	390 style="background-color:#3581ba">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	391 <span class="language-color" style="width:100%; background-color:#3581ba;" itemprop="keywords">Python</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	392 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	393 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	394
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	395
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	396
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	397 <div class="file-navigation in-mid-page">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	398 <a href="/vipints/GFFtools-GX/compare" aria-label="Compare, review, create a pull request" class="minibutton compact primary tooltipped tooltipped-s" aria-label="Compare & review" data-pjax>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	399 <span class="octicon octicon-git-compare"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	400 </a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	401
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	402
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	403
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	404 <div class="select-menu js-menu-container js-select-menu" >
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	405 <span class="minibutton select-menu-button js-menu-target" data-hotkey="w"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	406 data-master-branch="master"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	407 data-ref="master"
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	409 <span class="octicon octicon-git-branch"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	410 <i>branch:</i>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	411 <span class="js-select-button">master</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	412 </span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	413
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	414 <div class="select-menu-modal-holder js-menu-content js-navigation-container" data-pjax aria-hidden="true">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	415
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	416 <div class="select-menu-modal">
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	418 <span class="select-menu-title">Switch branches/tags</span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	419 <span class="octicon octicon-x js-menu-close"></span>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	421
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	425 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	426 <div class="select-menu-tabs">
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	429 <a href="#" data-tab-filter="branches" class="js-select-menu-tab">Branches</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	430 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	431 <li class="select-menu-tab">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	432 <a href="#" data-tab-filter="tags" class="js-select-menu-tab">Tags</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	433 </li>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	434 </ul>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	436 </div><!-- /.select-menu-filters -->
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	437
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	438 <div class="select-menu-list select-menu-tab-bucket js-select-menu-tab-bucket" data-tab-filter="branches">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	439
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	440 <div data-filterable-for="context-commitish-filter-field" data-filterable-type="substring">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	441
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	442
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	444 <span class="select-menu-item-icon octicon octicon-check"></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	445 <a href="/vipints/GFFtools-GX/tree/master"
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	450 title="master">master</a>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	452 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	453
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	458 <div data-filterable-for="context-commitish-filter-field" data-filterable-type="substring">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	459
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	460
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	461 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	462
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	463 <div class="select-menu-no-results">Nothing to show</div>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	465
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	466 </div> <!-- /.select-menu-modal -->
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	469
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	470
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	471 <div class="breadcrumb"><span class='repo-root js-repo-root'><span itemscope="" itemtype="http://data-vocabulary.org/Breadcrumb"><a href="/vipints/GFFtools-GX" data-branch="master" data-direction="back" data-pjax="true" itemscope="url"><span itemprop="title">GFFtools-GX</span></a></span></span><span class="separator"> / </span><form action="/login?return_to=%2Fvipints%2FGFFtools-GX" aria-label="Sign in to make or propose changes" class="js-new-blob-form tooltipped tooltipped-e new-file-link" method="post"><span aria-label="Sign in to make or propose changes" class="js-new-blob-submit octicon octicon-plus" data-test-id="create-new-git-file" role="button"></span></form></div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	472 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	473
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	474
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	475
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	476 <a href="/vipints/GFFtools-GX/find/master"
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	477 data-hotkey="t" class="js-show-file-finder" style="display:none" data-pjax>Show File Finder</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	478
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	479
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	480
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	481 <div class="commit commit-tease js-details-container" >
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	482 <p class="commit-title ">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	483 <a href="/vipints/GFFtools-GX/commit/86358adfbbf002a88b60abbbba834c988c2b1803" class="message" data-pjax="true" title="text modified">text modified</a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	484
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	486 <div class="commit-meta">
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	488 <a href="/vipints/GFFtools-GX/commit/86358adfbbf002a88b60abbbba834c988c2b1803" class="sha-block" data-pjax>latest commit <span class="sha">86358adfbb</span></a>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	489
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	490 <div class="authorship">
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	491 <img alt="Vipin" class="gravatar js-avatar" data-user="1714549" height="20" src="https://avatars0.githubusercontent.com/u/1714549?s=140" width="20" />
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	492 <span class="author-name"><a href="/vipints" data-skip-pjax="true" rel="author">vipints</a></span>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	493 authored <time class="updated" datetime="2014-06-10T19:46:10-04:00" is="relative-time">June 10, 2014</time>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	494
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	495 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	496 </div>
c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	497 </div>
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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances. vipints parents: diff changeset	499 <div class="file-wrap">
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13 <title>vipints/GFFtools-GX · GitHub</title>

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15 <link rel="fluid-icon" href="https://github.com/fluidicon.png" title="GitHub" />

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16 <link rel="apple-touch-icon" sizes="57x57" href="/apple-touch-icon-114.png" />

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17 <link rel="apple-touch-icon" sizes="114x114" href="/apple-touch-icon-114.png" />

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18 <link rel="apple-touch-icon" sizes="72x72" href="/apple-touch-icon-144.png" />

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19 <link rel="apple-touch-icon" sizes="144x144" href="/apple-touch-icon-144.png" />

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20 <meta property="fb:app_id" content="1401488693436528"/>

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22 <meta content="@github" name="twitter:site" /><meta content="summary" name="twitter:card" /><meta content="vipints/GFFtools-GX" name="twitter:title" /><meta content="GFFtools-GX - gfftools - Galaxy toolshed repository" name="twitter:description" /><meta content="https://avatars3.githubusercontent.com/u/1714549?s=400" name="twitter:image:src" />

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23 <meta content="GitHub" property="og:site_name" /><meta content="object" property="og:type" /><meta content="https://avatars3.githubusercontent.com/u/1714549?s=400" property="og:image" /><meta content="vipints/GFFtools-GX" property="og:title" /><meta content="https://github.com/vipints/GFFtools-GX" property="og:url" /><meta content="GFFtools-GX - gfftools - Galaxy toolshed repository" property="og:description" />

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26 <link rel="conduit-xhr" href="https://ghconduit.com:25035">

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32 <meta name="google-analytics" content="UA-3769691-2">

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39 <link rel="icon" type="image/x-icon" href="https://assets-cdn.github.com/favicon.ico" />

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53 <meta name="description" content="GFFtools-GX - gfftools - Galaxy toolshed repository" />

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56 <link href="https://github.com/vipints/GFFtools-GX/commits/master.atom" rel="alternate" title="Recent Commits to GFFtools-GX:master" type="application/atom+xml" />

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62 <a href="#start-of-content" tabindex="1" class="accessibility-aid js-skip-to-content">Skip to content</a>

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74 <a class="header-logo-wordmark" href="https://github.com/">

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75 <span class="mega-octicon octicon-logo-github"></span>

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79 <a class="button primary" href="/join">Sign up</a>

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80 <a class="button signin" href="/login?return_to=%2Fvipints%2FGFFtools-GX">Sign in</a>

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87 <li class="features"><a href="/features">Features</a></li>

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88 <li class="enterprise"><a href="https://enterprise.github.com/">Enterprise</a></li>

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89 <li class="blog"><a href="/blog">Blog</a></li>

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90 </ul>

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95 <input type="text" data-hotkey="s, /" name="q" id="js-command-bar-field" placeholder="Search or type a command" tabindex="1" autocapitalize="off"

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100 data-sha="e5e5e35ebe8bd3ee7600b6208431582926419975"

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108 <span class="minibutton select-menu-button js-menu-target" role="button" aria-haspopup="true">

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109 <span class="js-select-button">This repository</span>

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118 <div class="select-menu-item-text js-select-button-text">This repository</div>

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121 <div class="select-menu-item js-navigation-item js-all-repositories-navigation-item">

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122 <span class="select-menu-item-icon octicon octicon-check"></span>

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123 <input type="radio" name="search_target" value="global" />

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124 <div class="select-menu-item-text js-select-button-text">All repositories</div>

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131 <span class="help tooltipped tooltipped-s" aria-label="Show command bar help">

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132 <span class="octicon octicon-question"></span>

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146 <div id="start-of-content" class="accessibility-aid"></div>

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147 <div class="site" itemscope itemtype="http://schema.org/WebPage">

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151 <div class="pagehead repohead instapaper_ignore readability-menu">

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158 <li>

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159 <a href="/login?return_to=%2Fvipints%2FGFFtools-GX"

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160 class="minibutton with-count star-button tooltipped tooltipped-n"

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161 aria-label="You must be signed in to star a repository" rel="nofollow">

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162 <span class="octicon octicon-star"></span>Star

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165 <a class="social-count js-social-count" href="/vipints/GFFtools-GX/stargazers">

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166 0

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173 class="minibutton with-count js-toggler-target fork-button tooltipped tooltipped-n"

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174 aria-label="You must be signed in to fork a repository" rel="nofollow">

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175 <span class="octicon octicon-repo-forked"></span>Fork

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178 0

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183 <h1 itemscope itemtype="http://data-vocabulary.org/Breadcrumb" class="entry-title public">

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184 <span class="repo-label"><span>public</span></span>

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185 <span class="mega-octicon octicon-repo"></span>

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186 <span class="author"><a href="/vipints" class="url fn" itemprop="url" rel="author"><span itemprop="title">vipints</span></a></span><!--

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187 --><span class="path-divider">/</span><!--

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188 --><strong><a href="/vipints/GFFtools-GX" class="js-current-repository js-repo-home-link">GFFtools-GX</a></strong>

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191 <img alt="" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

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199 <div class="repository-with-sidebar repo-container new-discussion-timeline js-new-discussion-timeline with-full-navigation ">

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207 <a href="/vipints/GFFtools-GX" aria-label="Code" class="selected js-selected-navigation-item sunken-menu-item" data-hotkey="g c" data-pjax="true" data-selected-links="repo_source repo_downloads repo_commits repo_releases repo_tags repo_branches /vipints/GFFtools-GX">

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208 <span class="octicon octicon-code"></span> <span class="full-word">Code</span>

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209 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

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213 <a href="/vipints/GFFtools-GX/issues" aria-label="Issues" class="js-selected-navigation-item sunken-menu-item js-disable-pjax" data-hotkey="g i" data-selected-links="repo_issues /vipints/GFFtools-GX/issues">

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214 <span class="octicon octicon-issue-opened"></span> <span class="full-word">Issues</span>

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215 <span class='counter'>0</span>

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220 <a href="/vipints/GFFtools-GX/pulls" aria-label="Pull Requests" class="js-selected-navigation-item sunken-menu-item js-disable-pjax" data-hotkey="g p" data-selected-links="repo_pulls /vipints/GFFtools-GX/pulls">

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221 <span class="octicon octicon-git-pull-request"></span> <span class="full-word">Pull Requests</span>

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222 <span class='counter'>0</span>

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223 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

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224 </a> </li>

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227 </ul>

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228 <div class="sunken-menu-separator"></div>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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231 <li class="tooltipped tooltipped-w" aria-label="Pulse">

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232 <a href="/vipints/GFFtools-GX/pulse" aria-label="Pulse" class="js-selected-navigation-item sunken-menu-item" data-pjax="true" data-selected-links="pulse /vipints/GFFtools-GX/pulse">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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233 <span class="octicon octicon-pulse"></span> <span class="full-word">Pulse</span>

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234 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

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235 </a> </li>

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237 <li class="tooltipped tooltipped-w" aria-label="Graphs">

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238 <a href="/vipints/GFFtools-GX/graphs" aria-label="Graphs" class="js-selected-navigation-item sunken-menu-item" data-pjax="true" data-selected-links="repo_graphs repo_contributors /vipints/GFFtools-GX/graphs">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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239 <span class="octicon octicon-graph"></span> <span class="full-word">Graphs</span>

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240 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

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241 </a> </li>

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242

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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243 <li class="tooltipped tooltipped-w" aria-label="Network">

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244 <a href="/vipints/GFFtools-GX/network" aria-label="Network" class="js-selected-navigation-item sunken-menu-item js-disable-pjax" data-selected-links="repo_network /vipints/GFFtools-GX/network">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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245 <span class="octicon octicon-repo-forked"></span> <span class="full-word">Network</span>

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246 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

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247 </a> </li>

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248 </ul>

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251 </div>

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252 </div>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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254 <div class="only-with-full-nav">

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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259 <div class="clone-url open"

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260 data-protocol-type="http"

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261 data-url="/users/set_protocol?protocol_selector=http&protocol_type=clone">

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262 <h3><strong>HTTPS</strong> clone URL</h3>

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263 <div class="clone-url-box">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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264 <input type="text" class="clone js-url-field"

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265 value="https://github.com/vipints/GFFtools-GX.git" readonly="readonly">

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266 <span class="url-box-clippy">

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267 <button aria-label="copy to clipboard" class="js-zeroclipboard minibutton zeroclipboard-button" data-clipboard-text="https://github.com/vipints/GFFtools-GX.git" data-copied-hint="copied!" type="button"><span class="octicon octicon-clippy"></span></button>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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268 </span>

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269 </div>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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274 <div class="clone-url "

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275 data-protocol-type="subversion"

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276 data-url="/users/set_protocol?protocol_selector=subversion&protocol_type=clone">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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277 <h3><strong>Subversion</strong> checkout URL</h3>

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278 <div class="clone-url-box">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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279 <input type="text" class="clone js-url-field"

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280 value="https://github.com/vipints/GFFtools-GX" readonly="readonly">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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281 <span class="url-box-clippy">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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282 <button aria-label="copy to clipboard" class="js-zeroclipboard minibutton zeroclipboard-button" data-clipboard-text="https://github.com/vipints/GFFtools-GX" data-copied-hint="copied!" type="button"><span class="octicon octicon-clippy"></span></button>

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283 </span>

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284 </div>

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285 </div>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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287

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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288 <p class="clone-options">You can clone with

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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289 <a href="#" class="js-clone-selector" data-protocol="http">HTTPS</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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290 or <a href="#" class="js-clone-selector" data-protocol="subversion">Subversion</a>.

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291 <span class="help tooltipped tooltipped-n" aria-label="Get help on which URL is right for you.">

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292 <a href="https://help.github.com/articles/which-remote-url-should-i-use">

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293 <span class="octicon octicon-question"></span>

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294 </a>

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295 </span>

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296 </p>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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300 <a href="/vipints/GFFtools-GX/archive/master.zip"

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301 class="minibutton sidebar-button"

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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302 aria-label="Download vipints/GFFtools-GX as a zip file"

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303 title="Download vipints/GFFtools-GX as a zip file"

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304 rel="nofollow">

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305 <span class="octicon octicon-cloud-download"></span>

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306 Download ZIP

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307 </a>

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308 </div>

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309 </div>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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311 <div id="js-repo-pjax-container" class="repository-content context-loader-container" data-pjax-container>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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314 <span id="js-show-full-navigation"></span>

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315

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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316 <div class="repository-meta js-details-container ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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317 <div class="repository-description js-details-show">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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318 <p>gfftools - Galaxy toolshed repository</p>

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319 </div>

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323 </div>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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325 <div class="capped-box overall-summary ">

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326

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327 <div class="stats-switcher-viewport js-stats-switcher-viewport">

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328 <div class="stats-switcher-wrapper">

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329 <ul class="numbers-summary">

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330 <li class="commits">

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331 <a data-pjax href="/vipints/GFFtools-GX/commits/master">

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332 <span class="num">

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333 <span class="octicon octicon-history"></span>

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334 38

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335 </span>

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336 commits

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337 </a>

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338 </li>

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339 <li>

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340 <a data-pjax href="/vipints/GFFtools-GX/branches">

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341 <span class="num">

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342 <span class="octicon octicon-git-branch"></span>

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343 1

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344 </span>

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345 branch

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346 </a>

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349 <li>

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350 <a data-pjax href="/vipints/GFFtools-GX/releases">

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352 <span class="octicon octicon-tag"></span>

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353 0

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354 </span>

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355 releases

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356 </a>

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391 <span class="language-color" style="width:100%; background-color:#3581ba;" itemprop="keywords">Python</span>

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471 <div class="breadcrumb"><span class='repo-root js-repo-root'><span itemscope="" itemtype="http://data-vocabulary.org/Breadcrumb"><a href="/vipints/GFFtools-GX" data-branch="master" data-direction="back" data-pjax="true" itemscope="url"><span itemprop="title">GFFtools-GX</span></a></span></span><span class="separator"> / </span><form action="/login?return_to=%2Fvipints%2FGFFtools-GX" aria-label="Sign in to make or propose changes" class="js-new-blob-form tooltipped tooltipped-e new-file-link" method="post"><span aria-label="Sign in to make or propose changes" class="js-new-blob-submit octicon octicon-plus" data-test-id="create-new-git-file" role="button"></span></form></div>

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476 <a href="/vipints/GFFtools-GX/find/master"

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483 <a href="/vipints/GFFtools-GX/commit/86358adfbbf002a88b60abbbba834c988c2b1803" class="message" data-pjax="true" title="text modified">text modified</a>

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487 <button aria-label="Copy SHA" class="js-zeroclipboard zeroclipboard-link" data-clipboard-text="86358adfbbf002a88b60abbbba834c988c2b1803" data-copied-hint="copied!" type="button"><span class="octicon octicon-clippy"></span></button>

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488 <a href="/vipints/GFFtools-GX/commit/86358adfbbf002a88b60abbbba834c988c2b1803" class="sha-block" data-pjax>latest commit <span class="sha">86358adfbb</span></a>

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489

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490 <div class="authorship">

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491 <img alt="Vipin" class="gravatar js-avatar" data-user="1714549" height="20" src="https://avatars0.githubusercontent.com/u/1714549?s=140" width="20" />

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492 <span class="author-name"><a href="/vipints" data-skip-pjax="true" rel="author">vipints</a></span>

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493 authored <time class="updated" datetime="2014-06-10T19:46:10-04:00" is="relative-time">June 10, 2014</time>

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diff changeset

495 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

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496 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

497 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

498

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

499 <div class="file-wrap">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

500 <table class="files" data-pjax>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

501

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

502

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

503 <tbody class=""

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

504 data-url="/vipints/GFFtools-GX/file-list/master"

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

505 data-deferred-content-error="Failed to load latest commit information.">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

506 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

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diff changeset

507 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

508 <span class="octicon octicon-file-directory"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

509 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

510 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

511 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

512 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/tree/master/test-data" class="js-directory-link" id="24346e1b50066607059af36e3b684b24-8cea31e39d3636381f3f9c0e26ba10c7886e2977" title="test-data">test-data</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

513 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

514 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

515 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

516 <a href="/vipints/GFFtools-GX/commit/00dd26b8f36e14fe90fce6636998af1a5c80ca11" class="message" data-pjax="true" title="functional test added with files">functional test added with files</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

517 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

518 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

519 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

520 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T20:40:38Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

521 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

522 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

523 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

524 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

525 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

526 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

527 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

528 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

529 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/GFFParser.py" class="js-directory-link" id="4a9c2f3a2b51d00c039e9951aa5df3fd-3d795ad080f42cb17a58a6c6e762c337d33ef8b9" title="GFFParser.py">GFFParser.py</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

530 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

531 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

532 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

533 <a href="/vipints/GFFtools-GX/commit/9aafbf99a85bc47686d6bbcebbaec85aa2521536" class="message" data-pjax="true" title="added doc text to the functions">added doc text to the functions</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

534 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

535 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

536 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

537 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T23:28:04Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

538 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

539 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

540 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

541 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

542 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

543 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

544 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

545 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

546 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/README" class="js-directory-link" id="c47c7c7383225ab55ff591cb59c41e6b-2bcefcccef6585fed1e686fdcce8201514500050" title="README">README</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

547 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

548 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

549 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

550 <a href="/vipints/GFFtools-GX/commit/86358adfbbf002a88b60abbbba834c988c2b1803" class="message" data-pjax="true" title="text modified">text modified</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

551 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

552 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

553 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

554 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T23:46:10Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

555 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

556 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

557 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

558 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

559 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

560 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

561 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

562 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

563 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/bed_to_gff.py" class="js-directory-link" id="4fd14b034003e6ed6b3c1243f3f285ed-61383bb4effef34a00a95a3a8c2f4ed34d576f75" title="bed_to_gff.py">bed_to_gff.py</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

564 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

565 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

566 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

567 <a href="/vipints/GFFtools-GX/commit/c4433430d6a77ab127584aca9fcf4b092b83381b" class="message" data-pjax="true" title="imporved the desc text in bed2gff">imporved the desc text in bed2gff</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

568 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

569 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

570 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

571 <span class="css-truncate css-truncate-target"><time datetime="2014-06-09T19:12:02Z" is="time-ago">June 09, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

572 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

573 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

574 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

575 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

576 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

577 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

578 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

579 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

580 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/bed_to_gff.xml" class="js-directory-link" id="fd45df94f6d642a741c0c8d038949b37-ee194b9f0108cf3a827cf92a4ebd3ca8aec2d5e0" title="bed_to_gff.xml">bed_to_gff.xml</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

581 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

582 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

583 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

584 <a href="/vipints/GFFtools-GX/commit/25a73e190f096adbddfd638b40f14a2492895830" class="message" data-pjax="true" title="functional test done bed to gff conv">functional test done bed to gff conv</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

585 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

586 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

587 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

588 <span class="css-truncate css-truncate-target"><time datetime="2014-06-03T22:02:31Z" is="time-ago">June 03, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

589 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

590 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

591 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

592 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

593 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

594 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

595 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

596 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

597 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gbk_to_gff.py" class="js-directory-link" id="8cedf4409efd74682d25ee79bb3574dc-c517f2ad12e8768f5b79863db992dd7e67d27d7d" title="gbk_to_gff.py">gbk_to_gff.py</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

598 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

599 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

600 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

601 <a href="/vipints/GFFtools-GX/commit/d8d93d8aac537003e4f7fde1e6662b841bd06e44" class="message" data-pjax="true" title="desc text added">desc text added</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

602 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

603 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

604 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

605 <span class="css-truncate css-truncate-target"><time datetime="2014-06-09T19:20:21Z" is="time-ago">June 09, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

606 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

607 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

608 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

609 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

610 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

611 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

612 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

613 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

614 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gbk_to_gff.xml" class="js-directory-link" id="5e708155a06e4244e26c978ed02c6fd2-1112eaa8921c4fc10d5948a999a5ce7175f64411" title="gbk_to_gff.xml">gbk_to_gff.xml</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

615 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

616 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

617 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

618 <a href="/vipints/GFFtools-GX/commit/00dd26b8f36e14fe90fce6636998af1a5c80ca11" class="message" data-pjax="true" title="functional test added with files">functional test added with files</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

619 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

620 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

621 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

622 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T20:40:38Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

623 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

624 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

625 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

626 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

627 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

628 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

629 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

630 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

631 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gff_to_bed.py" class="js-directory-link" id="95b17a03c0948b20d1264fcd269b60fa-37e6f149ae4fe61d761212c00e9300d3e4ecf7bb" title="gff_to_bed.py">gff_to_bed.py</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

632 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

633 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

634 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

635 <a href="/vipints/GFFtools-GX/commit/5d913653e57fdd77e52822f161481ce91a86247a" class="message" data-pjax="true" title="license information updated">license information updated</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

636 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

637 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

638 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

639 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T23:33:25Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

640 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

641 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

642 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

643 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

644 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

645 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

646 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

647 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

648 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gff_to_bed.xml" class="js-directory-link" id="8c7d5ae4b79728262acfc56888f2444e-f2932e276ede0949dc550dc46565cfd36c5c677a" title="gff_to_bed.xml">gff_to_bed.xml</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

649 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

650 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

651 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

652 <a href="/vipints/GFFtools-GX/commit/f80dd4d3e12ca474a360c5a3340294dd3c1c998a" class="message" data-pjax="true" title="functional test done">functional test done</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

653 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

654 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

655 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

656 <span class="css-truncate css-truncate-target"><time datetime="2014-06-03T20:48:20Z" is="time-ago">June 03, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

657 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

658 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

659 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

660 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

661 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

662 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

663 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

664 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

665 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gff_to_gtf.py" class="js-directory-link" id="88b7a441373dfec1e07cd28bb1eb8c3e-a864f8b163c7458da0012144ccd2aa3fbbd3eff9" title="gff_to_gtf.py">gff_to_gtf.py</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

666 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

667 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

668 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

669 <a href="/vipints/GFFtools-GX/commit/1654e766fb90d47f44a87338c91aecd23dfc761b" class="message" data-pjax="true" title="license information updated">license information updated</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

670 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

671 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

672 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

673 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T23:35:18Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

674 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

675 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

676 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

677 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

678 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

679 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

680 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

681 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

682 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gff_to_gtf.xml" class="js-directory-link" id="f4676750a1f71b9fbf35b537b0546842-3d421e35bfca497c46026f49066f408104f08116" title="gff_to_gtf.xml">gff_to_gtf.xml</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

683 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

684 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

685 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

686 <a href="/vipints/GFFtools-GX/commit/173145b45e3d6265517486cc06239e3a6dd21104" class="message" data-pjax="true" title="tool id changed">tool id changed</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

687 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

688 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

689 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

690 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T20:48:47Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

691 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

692 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

693 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

694 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

695 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

696 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

697 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

698 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

699 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gtf_to_gff.py" class="js-directory-link" id="6989ac39182645599caeb47b4e0e8ef6-38a340975f42f7845b9377275929364265bfb0f1" title="gtf_to_gff.py">gtf_to_gff.py</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

700 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

701 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

702 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

703 <a href="/vipints/GFFtools-GX/commit/7b6f0278ee32204040542552b511df25491992b0" class="message" data-pjax="true" title="requirement field updated">requirement field updated</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

704 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

705 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

706 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

707 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T23:37:48Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

708 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

709 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

710 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

711 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

712 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

713 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

714 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

715 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

716 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/gtf_to_gff.xml" class="js-directory-link" id="a8bd25db400514c2556192045eacd820-ec16bf58738e8a83c26484936b468b19069fa9f9" title="gtf_to_gff.xml">gtf_to_gff.xml</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

717 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

718 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

719 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

720 <a href="/vipints/GFFtools-GX/commit/a637fd1e39ae8781052a2fcd8b381ffa16fcf2b8" class="message" data-pjax="true" title="base template wrapper for gtf to gff program">base template wrapper for gtf to gff program</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

721 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

722 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

723 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

724 <span class="css-truncate css-truncate-target"><time datetime="2014-06-06T23:59:07Z" is="time-ago">June 06, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

725 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

726 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

727 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

728 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

729 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

730 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

731 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

732 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

733 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/helper.py" class="js-directory-link" id="702b6abf015bfdb4e41308ddd3b297a9-7ccc8705a62e0a1068040b37b704d7dc511ef44f" title="helper.py">helper.py</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

734 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

735 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

736 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

737 <a href="/vipints/GFFtools-GX/commit/780bcbefa142032acae7058386de9ec4e4834754" class="message" data-pjax="true" title="doc text improved">doc text improved</a>

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738 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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739 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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740 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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741 <span class="css-truncate css-truncate-target"><time datetime="2014-06-08T18:04:11Z" is="time-ago">June 08, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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742 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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743 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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744 <tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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745 <td class="icon">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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746 <span class="octicon octicon-file-text"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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747 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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748 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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749 <td class="content">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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750 <span class="css-truncate css-truncate-target"><a href="/vipints/GFFtools-GX/blob/master/tool_conf.xml.sample" class="js-directory-link" id="76a06ab03a6f35bfb6ff2be40e654b7e-e26478f762dbc5e03f339bc5598086009e4f8be0" title="tool_conf.xml.sample">tool_conf.xml.sample</a></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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751 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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752 <td class="message">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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753 <span class="css-truncate css-truncate-target ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

754 <a href="/vipints/GFFtools-GX/commit/0b284f543f4c64c78f980537cd8ee2aae700182a" class="message" data-pjax="true" title="tool panel entries">tool panel entries</a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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755 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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756 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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757 <td class="age">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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758 <span class="css-truncate css-truncate-target"><time datetime="2014-06-10T22:52:18Z" is="time-ago">June 10, 2014</time></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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759 </td>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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760 </tr>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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761 </tbody>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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762

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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763 </table>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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764 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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765

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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766

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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767 <div id="readme" class="clearfix announce instapaper_body ">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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768 <span class="name">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

769 <span class="octicon octicon-book"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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770 README

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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771 </span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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772

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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773 <div class="plain"><pre>A collection of tools for converting genome annotation between GTF (Gene Transfer Format),

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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774 BED (Browser Extensible Data) and GFF (Generic Feature Format).

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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775

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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776 INTRODUCTION

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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777

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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778 Several genome annotation centers provide their data in GTF, BED, GFF3 etc. I have few programs

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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779 they mainly deals with converting between GTF, BED and GFF3 formats. They are extensively tested

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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780 with files from different centers like ENSEMBL, UCSC, JGI and NCBI AceView. Please follow the

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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781 instructions below to clone these tools into your galaxy instance.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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782

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

783 CONTENTS

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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784

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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785 Tool configuration files in *.xml format.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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786

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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787 gtf_to_gff.xml

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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788 gff_to_gtf.xml

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

789 bed_to_gff.xml

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

790 gff_to_bed.xml

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

791 gbk_to_gff.xml

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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792

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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793 Python based scripts.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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794

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

795 gtf_to_gff.py: convert data from GTF to valid GFF3.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

796 gff_to_gtf.py: convert data from GFF3 to GTF.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

797 bed_to_gff.py: convert data from a 12 column UCSC wiggle BED format to GFF3.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

798 gff_to_bed.py: convert gene transcript annotation from GFF3 to UCSC wiggle 12 column BED format.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

vipints

parents:

diff changeset

799 gbk_to_gff.py: convert data from genbank format to GFF.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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800 GFFParser.py: Parse GFF/GTF files.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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801 helper.py: Utility functions.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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802

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

803 test-data: Test data set. (move to your galaxy_root_folder/test-data/)

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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804

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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805 You may need to move the test files into your test-data directory so galaxy can find them.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

806 If you want to run the functional tests eg as:

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

807

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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808 exmaple:

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

809 sh run_functional_tests.sh -id fml_gtf2gff

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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810

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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811 REQUIREMENTS

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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812

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

813 python

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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814

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

815 COMMENTS/QUESTIONS

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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816

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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817 I can be reached at vipin [at] cbio.mskcc.org

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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818

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

819 LICENSE

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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820

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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822 2013-2014 Memorial Sloan Kettering Cancer Center

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

823

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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824 This program is free software; you can redistribute it and/or modify

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

825 it under the terms of the GNU General Public License as published by

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

826 the Free Software Foundation; either version 3 of the License, or

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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parents:

diff changeset

827 (at your option) any later version.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

828

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

829 COURTESY

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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830

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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831 To the Galaxy Team.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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832 </pre></div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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833 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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834

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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835

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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836 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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837

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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838 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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839 <div class="modal-backdrop"></div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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840 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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841 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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842

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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843

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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844 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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845

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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846 <div class="container">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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847 <div class="site-footer">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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848 <ul class="site-footer-links right">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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849 <li><a href="https://status.github.com/">Status</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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850 <li><a href="http://developer.github.com">API</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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851 <li><a href="http://training.github.com">Training</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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852 <li><a href="http://shop.github.com">Shop</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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853 <li><a href="/blog">Blog</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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854 <li><a href="/about">About</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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855

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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856 </ul>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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857

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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858 <a href="/">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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859 <span class="mega-octicon octicon-mark-github" title="GitHub"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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860 </a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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861

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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862 <ul class="site-footer-links">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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diff changeset

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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864 <li><a href="/site/terms">Terms</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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865 <li><a href="/site/privacy">Privacy</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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866 <li><a href="/security">Security</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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867 <li><a href="/contact">Contact</a></li>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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868 </ul>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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869 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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870 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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871

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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872

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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873 <div class="fullscreen-overlay js-fullscreen-overlay" id="fullscreen_overlay">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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874 <div class="fullscreen-container js-fullscreen-container">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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875 <div class="textarea-wrap">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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876 <textarea name="fullscreen-contents" id="fullscreen-contents" class="fullscreen-contents js-fullscreen-contents" placeholder="" data-suggester="fullscreen_suggester"></textarea>

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877 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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878 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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879 <div class="fullscreen-sidebar">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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880 <a href="#" class="exit-fullscreen js-exit-fullscreen tooltipped tooltipped-w" aria-label="Exit Zen Mode">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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881 <span class="mega-octicon octicon-screen-normal"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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882 </a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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883 <a href="#" class="theme-switcher js-theme-switcher tooltipped tooltipped-w"

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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884 aria-label="Switch themes">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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885 <span class="octicon octicon-color-mode"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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886 </a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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887 </div>

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888 </div>

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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892 <div id="ajax-error-message" class="flash flash-error">

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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893 <span class="octicon octicon-alert"></span>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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894 <a href="#" class="octicon octicon-x close js-ajax-error-dismiss"></a>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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895 Something went wrong with that request. Please try again.

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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896 </div>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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899 <script crossorigin="anonymous" src="https://assets-cdn.github.com/assets/frameworks-c044173f1e759e8299dbe414ec8ed23e4405bdc5.js" type="text/javascript"></script>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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900 <script async="async" crossorigin="anonymous" src="https://assets-cdn.github.com/assets/github-abafbb1b61823e40063e9f65128096bcfef3b025.js" type="text/javascript"></script>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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903 <script async src="https://www.google-analytics.com/analytics.js"></script>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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904 </body>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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905 </html>

c6cf723c2ed4 Uploaded version 2.0.0 of gfftools to integrate local Galaxy instances.

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906

Mercurial > repos > vipints > fml_gff3togtf

annotate GFFtools-GX @ 1:c6cf723c2ed4