Mercurial > repos > vipints > rdiff

view rDiff/bin/rdiff_config.sh.sample @ 2:233c30f91d66

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
updated python based GFF parsing module which will handle GTF/GFF/GFF3 file types
author vipints <vipin@cbio.mskcc.org>
date Tue, 08 Oct 2013 07:15:44 -0400
parents 0f80a5141704
children
line wrap: on
line source

#!/bin/bash
export RDIFF_VERSION=0.3
export RDIFF_PATH=/home/galaxy/software/
export RDIFF_SRC_PATH=${RDIFF_PATH}/src
export RDIFF_BIN_PATH=${RDIFF_PATH}/bin
export RDIFF_INTERPRETER=octave
export RDIFF_OCTAVE_BIN_PATH=/home/galaxy/software/octave/source/octave-3.6.3/octave
export RDIFF_OCTAVE_MKOCT=/home/galaxy/software/bin/mkoctfile
export MATLAB_BIN_PATH=
export MATLAB_MEX_PATH=
export MATLAB_INCLUDE_DIR=
export RDIFF_SAMTOOLS_BIN_DIR=/home/galaxy/software/samtools-0.1.17/samtools
export RDIFF_SAMTOOLS_LIB_DIR=/home/galaxy/software/samtools-0.1.17/
export RDIFF_SAMTOOLS_INCLUDE_DIR=/home/galaxy/software/samtools-0.1.17/
export RDIFF_PYTHON_PATH=/usr/bin/python