Mercurial > repos > wolma > mimodd
changeset 13:f0b3871cb869 draft
Uploaded
| author | wolma |
|---|---|
| date | Mon, 25 Apr 2016 17:27:25 -0400 |
| parents | c2c70edb70eb |
| children | 5e9c1c67716b |
| files | mimodd tool_dependencies.xml |
| diffstat | 2 files changed, 37 insertions(+), 2055 deletions(-) [+] |
line wrap: on
line diff
--- a/mimodd Mon Apr 25 17:26:32 2016 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,2046 +0,0 @@ -<!DOCTYPE html> -<html lang="en"> -<head> - - <meta http-equiv="X-UA-Compatible" content="IE=edge" /> - <meta charset="utf-8"> - <title> - wm75 / mimodd — Bitbucket -</title> - <script type="text/javascript">window.NREUM||(NREUM={}),__nr_require=function(e,t,n){function r(n){if(!t[n]){var o=t[n]={exports:{}};e[n][0].call(o.exports,function(t){var o=e[n][1][t];return r(o||t)},o,o.exports)}return t[n].exports}if("function"==typeof __nr_require)return __nr_require;for(var o=0;o<n.length;o++)r(n[o]);return r}({1:[function(e,t,n){function r(e,t){return function(){o(e,[(new Date).getTime()].concat(a(arguments)),null,t)}}var o=e("handle"),i=e(2),a=e(3);"undefined"==typeof window.newrelic&&(newrelic=NREUM);var u=["setPageViewName","addPageAction","setCustomAttribute","finished","addToTrace","inlineHit"],c=["addPageAction"],f="api-";i(u,function(e,t){newrelic[t]=r(f+t,"api")}),i(c,function(e,t){newrelic[t]=r(f+t)}),t.exports=newrelic,newrelic.noticeError=function(e){"string"==typeof e&&(e=new Error(e)),o("err",[e,(new Date).getTime()])}},{}],2:[function(e,t,n){function r(e,t){var n=[],r="",i=0;for(r in e)o.call(e,r)&&(n[i]=t(r,e[r]),i+=1);return n}var o=Object.prototype.hasOwnProperty;t.exports=r},{}],3:[function(e,t,n){function r(e,t,n){t||(t=0),"undefined"==typeof n&&(n=e?e.length:0);for(var r=-1,o=n-t||0,i=Array(0>o?0:o);++r<o;)i[r]=e[t+r];return i}t.exports=r},{}],ee:[function(e,t,n){function r(){}function o(e){function t(e){return e&&e instanceof r?e:e?u(e,a,i):i()}function n(n,r,o){e&&e(n,r,o);for(var i=t(o),a=l(n),u=a.length,c=0;u>c;c++)a[c].apply(i,r);var s=f[g[n]];return s&&s.push([m,n,r,i]),i}function p(e,t){w[e]=l(e).concat(t)}function l(e){return w[e]||[]}function d(e){return s[e]=s[e]||o(n)}function v(e,t){c(e,function(e,n){t=t||"feature",g[n]=t,t in f||(f[t]=[])})}var w={},g={},m={on:p,emit:n,get:d,listeners:l,context:t,buffer:v};return m}function i(){return new r}var a="nr@context",u=e("gos"),c=e(2),f={},s={},p=t.exports=o();p.backlog=f},{}],gos:[function(e,t,n){function r(e,t,n){if(o.call(e,t))return e[t];var r=n();if(Object.defineProperty&&Object.keys)try{return Object.defineProperty(e,t,{value:r,writable:!0,enumerable:!1}),r}catch(i){}return e[t]=r,r}var o=Object.prototype.hasOwnProperty;t.exports=r},{}],handle:[function(e,t,n){function r(e,t,n,r){o.buffer([e],r),o.emit(e,t,n)}var o=e("ee").get("handle");t.exports=r,r.ee=o},{}],id:[function(e,t,n){function r(e){var t=typeof e;return!e||"object"!==t&&"function"!==t?-1:e===window?0:a(e,i,function(){return o++})}var o=1,i="nr@id",a=e("gos");t.exports=r},{}],loader:[function(e,t,n){function r(){if(!w++){var e=v.info=NREUM.info,t=s.getElementsByTagName("script")[0];if(e&&e.licenseKey&&e.applicationID&&t){c(l,function(t,n){e[t]||(e[t]=n)});var n="https"===p.split(":")[0]||e.sslForHttp;v.proto=n?"https://":"http://",u("mark",["onload",a()],null,"api");var r=s.createElement("script");r.src=v.proto+e.agent,t.parentNode.insertBefore(r,t)}}}function o(){"complete"===s.readyState&&i()}function i(){u("mark",["domContent",a()],null,"api")}function a(){return(new Date).getTime()}var u=e("handle"),c=e(2),f=window,s=f.document;NREUM.o={ST:setTimeout,CT:clearTimeout,XHR:f.XMLHttpRequest,REQ:f.Request,EV:f.Event,PR:f.Promise,MO:f.MutationObserver},e(1);var p=""+location,l={beacon:"bam.nr-data.net",errorBeacon:"bam.nr-data.net",agent:"js-agent.newrelic.com/nr-918.min.js"},d=window.XMLHttpRequest&&XMLHttpRequest.prototype&&XMLHttpRequest.prototype.addEventListener&&!/CriOS/.test(navigator.userAgent),v=t.exports={offset:a(),origin:p,features:{},xhrWrappable:d};s.addEventListener?(s.addEventListener("DOMContentLoaded",i,!1),f.addEventListener("load",r,!1)):(s.attachEvent("onreadystatechange",o),f.attachEvent("onload",r)),u("mark",["firstbyte",a()],null,"api");var w=0},{}]},{},["loader"]);</script> - - - -<meta id="bb-canon-url" name="bb-canon-url" content="https://bitbucket.org"> - -<meta name="bb-view-name" content="bitbucket.apps.repo2.views.landing"> -<meta name="ignore-whitespace" content="False"> -<meta name="tab-size" content="None"> - -<meta name="application-name" content="Bitbucket"> -<meta name="apple-mobile-web-app-title" content="Bitbucket"> -<meta name="theme-color" content="#205081"> -<meta name="msapplication-TileColor" content="#205081"> -<meta name="msapplication-TileImage" content="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/logos/bitbucket/white-256.png"> -<link rel="apple-touch-icon" sizes="192x192" type="image/png" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b//img/bitbucket_avatar/192/bitbucket.png"> -<link rel="icon" sizes="192x192" type="image/png" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b//img/bitbucket_avatar/192/bitbucket.png"> -<link rel="icon" sizes="16x16 32x32" type="image/x-icon" href="/favicon.ico"> -<link rel="search" type="application/opensearchdescription+xml" href="/opensearch.xml" title="Bitbucket"> - - <meta name="description" content=" - - - - Hg repository hosted by Bitbucket. Bitbucket provides - free source code hosting for Git and Mercurial. - - - -"> - - - - - - - - <link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/css/entry/vendor.css" /> -<link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/css/entry/app.css" /> - - - - - - <script src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/dist/webpack/early.js"></script> - - - - <link href="/wm75/mimodd/rss?token=141fac808381789e181d67dda14ad78c" rel="alternate nofollow" type="application/rss+xml" title="RSS feed for mimodd" /> - - <meta name="twitter:card" content="summary"/> - <meta name="twitter:site" content="@bitbucket"/> - <meta name="og:type" content="bitbucket:hgrepository"/> - <meta name="og:title" content="wm75 / mimodd"/> - <meta name="og:url" content="https://bitbucket.org/wm75/mimodd"/> - - <meta name="og:description" content="Hg repository hosted by Bitbucket."/> - - - <meta name="og:image" content="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/repo-avatars/default.svg"/> - -</head> -<body class="production aui-page-sidebar aui-sidebar-expanded" - data-static-url="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/" -data-base-url="https://bitbucket.org" -data-base-api-url="https://api.bitbucket.org" -data-no-avatar-image="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/default_avatar/user_blue.svg" -data-current-user="{"username": "wm75", "displayName": "Wolfgang Maier", "uuid": "{1f4cc38e-7962-4548-bc88-0c2002b1ccd7}", "firstName": "Wolfgang", "avatarUrl": "https://bitbucket.org/account/wm75/avatar/32/?ts=1461614693", "lastName": "Maier", "isTeam": false, "isSshEnabled": false, "isKbdShortcutsEnabled": true, "id": 5304568, "isAuthenticated": true}" -data-atlassian-id="{"loginStatusUrl": "https://id.atlassian.com/profile/rest/profile"}" -data-settings="{"MENTIONS_MIN_QUERY_LENGTH": 3}" - -data-current-repo="{"scm": "hg", "readOnly": false, "mainbranch": {"name": "default"}, "language": "xml", "owner": {"username": "wm75", "isTeam": false}, "fullslug": "wm75/mimodd", "slug": "mimodd", "id": 18108127, "pygmentsLanguage": "xml"}" - - - - - - -data-browser-monitoring="true"> -<div id="page"> - <div id="wrapper"> - - - - - - <header id="header" role="banner" data-module="header/tracking"> - - - - - <nav class="aui-header aui-dropdown2-trigger-group" role="navigation"> - <div class="aui-header-inner"> - <div class="aui-header-primary"> - - - <div class="aui-header-before"> - <button class="app-switcher-trigger aui-dropdown2-trigger aui-dropdown2-trigger-arrowless" aria-controls="app-switcher" aria-haspopup="true" tabindex="0" - - data-nav-links-count="0" - - > - <span class="aui-icon aui-icon-small aui-iconfont-appswitcher">Linked applications</span> - </button> - - <nav id="app-switcher" class="aui-dropdown2 aui-style-default"> - <div class="aui-dropdown2-section blank-slate"> - <h2>Connect Bitbucket with other great Atlassian products:</h2> - <dl> - <dt class="jira">JIRA</dt> - <dd>Project and issue tracking</dd> - <dt class="confluence">Confluence</dt> - <dd>Collaboration and content sharing</dd> - <dt class="bamboo">Bamboo</dt> - <dd>Continuous integration</dd> - </dl> - <ul> - <li> - <a href="https://www.atlassian.com/ondemand/signup/?product=jira.ondemand,com.atlassian.bitbucket&utm_source=bitbucket&utm_medium=button&utm_campaign=app_switcher&utm_content=trial_button" - class="aui-button aui-button-primary" target="_blank" id="ondemand-trial" data-ct="header.app.switcher.dropdown.trial">Free trial</a> - </li> - <li> - <a href="https://www.atlassian.com/software?utm_source=bitbucket&utm_medium=button&utm_campaign=app_switcher&utm_content=learn_more_button#cloud-products" - class="aui-button" target="_blank" id="ondemand-learn-more" data-ct="header.app.switcher.dropdown.learnmore">Learn more</a> - </li> - </ul> - </div> - </nav> - - </div> - - - - <h1 class="aui-header-logo aui-header-logo-bitbucket " - id="logo" data-ct="header.logo"> - <a href="/"> - <span class="aui-header-logo-device">Bitbucket</span> - </a> - </h1> - - - -<script id="repo-dropdown-template" type="text/html"> - - - - [[#hasViewed]] - <div class="aui-dropdown2-section"> - <strong class="viewed">Recently viewed</strong> - <ul> - [[#viewed]] - <li class="[[#is_private]]private[[/is_private]][[^is_private]]public[[/is_private]] repository"> - <a href="[[url]]" title="[[owner]][[#project]] / [[project]][[/project]] / [[name]]" class="aui-icon-container recently-viewed repo-link" - data-ct="header.repository.dropdown.repository" data-ct-data="{'type': 'recently-viewed'}"> - <span class="aui-avatar aui-avatar-xsmall[[#project]] aui-avatar-project[[/project]]"> - <span class="aui-avatar-inner"> - <img src="[[{avatar}]]"> - </span> - </span> - <span class="dropdown-path"> - <span class="dropdown-path-part">[[#project]][[project]][[/project]][[^project]][[owner]][[/project]]</span> - <span class="dropdown-path-separator">/</span> - <span class="dropdown-path-part dropdown-path-part--primary">[[name]]</span> - </span> - </a> - </li> - [[/viewed]] - </ul> - </div> - [[/hasViewed]] - [[#hasUpdated]] - <div class="aui-dropdown2-section"> - <strong class="updated">Recently updated</strong> - <ul> - [[#updated]] - <li class="[[#is_private]]private[[/is_private]][[^is_private]]public[[/is_private]] repository"> - <a href="[[url]]" title="[[owner]][[#project]] / [[project]][[/project]] / [[name]]" class="aui-icon-container recently-updated repo-link" - data-ct="header.repository.dropdown.repository" data-ct-data="{'type': 'recently-updated'}"> - <span class="aui-avatar aui-avatar-xsmall[[#project]] aui-avatar-project[[/project]]"> - <span class="aui-avatar-inner"> - <img src="[[{avatar}]]"> - </span> - </span> - <span class="dropdown-path"> - <span class="dropdown-path-part">[[#project]][[project]][[/project]][[^project]][[owner]][[/project]]</span> - <span class="dropdown-path-separator">/</span> - <span class="dropdown-path-part dropdown-path-part--primary">[[name]]</span> - </span> - </a> - </li> - [[/updated]] - </ul> - </div> - [[/hasUpdated]] - - - </script> -<script id="snippet-dropdown-template" type="text/html"> - <div class="aui-dropdown2-section"> - <strong>[[sectionTitle]]</strong> - <ul class="aui-list-truncate"> - [[#snippets]] - <li> - <a href="[[links.html.href]]">[[owner.display_name]] / [[name]]</a> - </li> - [[/snippets]] - </ul> -</div> - - </script> -<ul class="aui-nav"> - - <li> - <script id="team-dropdown-template" type="text/html"> - - -<div class="aui-dropdown2-section primary"> - <ul class="aui-list-truncate"> - [[#teams]] - <li> - <a href="/[[username]]/" class="aui-icon-container team-link" data-ct="header.team.dropdown.team"> - <span class="aui-avatar aui-avatar-xsmall"> - <span class="aui-avatar-inner"> - <img src="[[avatar]]"> - </span> - </span> - [[display_name]] - </a> - </li> - [[/teams]] - </ul> -</div> - -<div class="aui-dropdown2-section"> - <ul> - <li> - <a href="/account/create-team/?team_source=header" - id="create-team-link" data-ct="header.team.dropdown.create" data-ct-data="{'empty': false}">Create team</a> - </li> - </ul> -</div> - - </script> - <a class="aui-dropdown2-trigger" href="#teams-dropdown" id="teams-dropdown-trigger" - data-module="header/teams-dropdown" - aria-owns="teams-dropdown" aria-haspopup="true"> - Teams - <span class="aui-icon-dropdown"></span> - </a> - <div id="teams-dropdown" class="aui-dropdown2 aui-style-default"> - <div class="aui-dropdown2-section nav-dropdown--blank-state"> - <p> - Effective collaboration starts with teams and projects. - </p> - <ul> - <li> - <a class="aui-button aui-button-link nav-dropdown--blank-state--cta nav-dropdown--blank-state--link" id="create-team-blank-slate" - data-ct="header.team.dropdown.create" data-ct-data="{'empty': true}" - href="/account/create-team/?team_source=menu_blank" - >Create a team</a> - </li> - </ul> - </div> - </div> - </li> - <li> - <script id="projects-dropdown-template" type="text/html"> - - -[[#hasProjects]] - <div class="aui-dropdown2-section"> - <strong>Recently viewed</strong> - <ul class="aui-list-truncate"> - [[#projects]] - <li> - <a href="/account/user/[[owner.username]]/projects/[[key]]" class="aui-icon-container project-link"> - <span class="aui-avatar aui-avatar-xsmall aui-avatar-project"> - <span class="aui-avatar-inner"> - <img src="[[links.avatar.href]]"> - </span> - </span> - [[name]] - </a> - </li> - [[/projects]] - </ul> - </div> -[[/hasProjects]] - -[[#isAdmin]] - <div class="aui-dropdown2-section"> - <ul> - <li> - <a href="/account/projects/create" - id="create-project-link">Create project</a> - </li> - </ul> - </div> -[[/isAdmin]] - - </script> - <a class="aui-dropdown2-trigger" href="#teams-dropdown" id="projects-dropdown-trigger" - data-module="header/projects-dropdown" - aria-owns="projects-dropdown" aria-haspopup="true"> - Projects - <span class="aui-icon-dropdown"></span> - </a> - <div id="projects-dropdown" class="aui-dropdown2 aui-style-default"> - <div class="aui-dropdown2-section nav-dropdown--blank-state"> - <p> - - Get a team, get projects, get organized. - - </p> - <ul> - <li> - <a class="aui-button aui-button-link nav-dropdown--blank-state--cta nav-dropdown--blank-state--link" id="projects-create-team-blank-slate" - href="/account/create-team/?team_source=menu_blank" - >Create a team</a> - </li> - </ul> - </div> - </div> - </li> - <li> - <a class="aui-dropdown2-trigger" id="repositories-dropdown-trigger" - aria-owns="repo-dropdown" aria-haspopup="true" href="/repo/mine"> - Repositories - <span class="aui-icon-dropdown"></span> - </a> - <nav id="repo-dropdown" class="aui-dropdown2 aui-style-default"> - <div id="repo-dropdown-recent" data-module="header/recent-repos"></div> - <div class="aui-dropdown2-section"> - <ul> - <li> - <a href="/repo/create" class="new-repository" id="create-repo-link" data-ct="header.repository.dropdown.create"> - Create repository - </a> - </li> - <li> - <a href="/repo/import" class="import-repository" id="import-repo-link" data-ct="header.repository.dropdown.import"> - Import repository - </a> - </li> - </ul> - </div> - </nav> - </li> - <li> - <a class="aui-dropdown2-trigger" id="snippets-dropdown-trigger" - aria-owns="nav-recent-snippets" aria-haspopup="true" href="/snippets/"> - Snippets - <span class="aui-icon-dropdown"></span> - </a> - <nav id="nav-recent-snippets" class="aui-dropdown2 aui-style-default"> - <div id="snippet-dropdown-recent" class="aui-dropdown2-section" - data-module="snippets/recent-list"></div> - <div class="aui-dropdown2-section"> - <ul> - <li> - <a href="/snippets/new" data-ct="header.snippets.dropdown.create"> - Create snippet - </a> - </li> - </ul> - </div> - </nav> - </li> - -</ul> - - </div> - <div class="aui-header-secondary"> - - - -<ul role="menu" class="aui-nav"> - - <li> - <form action="/repo/all" method="get" class="aui-quicksearch"> - <label for="search-query" class="assistive">owner/repository</label> - <input id="search-query" class="bb-repo-typeahead" type="text" - placeholder="Find a repository…" name="name" autocomplete="off" - data-bb-typeahead-focus="false"> - </form> - </li> - <li> - <a id="help-menu-link" class="aui-nav-link" href="#" - aria-controls="help-menu-dialog" - data-aui-trigger> - <span id="help-menu-icon" class="aui-icon aui-icon-small aui-iconfont-help"></span> - </a> - </li> - - - <li> - <a class="aui-dropdown2-trigger aui-dropdown2-trigger-arrowless" - aria-owns="user-dropdown" aria-haspopup="true" data-container="#header .aui-header-inner" - href="/wm75/" title="wm75" id="user-dropdown-trigger"> - <div class="aui-avatar aui-avatar-small"> - <div class="aui-avatar-inner"> - <img src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/default_avatar/user_blue.svg" class="deferred-image" data-src-url="https://bitbucket.org/account/wm75/avatar/32/?ts=1461614693" data-src-url-2x="https://bitbucket.org/account/wm75/avatar/64/?ts=1461614693" alt="Logged in as wm75" height="24" width="24"> - </div> - </div> - </a> - <nav id="user-dropdown" class="aui-dropdown2 aui-style-default" aria-hidden="true"> - <div class="aui-dropdown2-section"> - <div class="aid-profile"> - <div class="aui-avatar aui-avatar-large"> - <div class="aui-avatar-inner"> - - - - - - <a class="aid-profile--change-avatar hoverable" target="_blank" href="/account/user/wm75/#avatar"> - <span class="hoverable--overlay"> - <span class="aui-icon aui-icon-large aid-profile--avatar-icon"></span> - </span> - <img src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/default_avatar/user_blue.svg" class="deferred-image" data-src-url="https://bitbucket.org/account/wm75/avatar/48/?ts=1461614693" data-src-url-2x="https://bitbucket.org/account/wm75/avatar/96/?ts=1461614693" height="48" width="48"> - </a> - </div> - </div> - <div class="aid-profile--info"> - <div class="aid-profile--name"> - Wolfgang Maier - </div> - <div class="aid-profile--email"> - wolfgang.maier@biologie.uni-freiburg.de - </div> - </div> - </div> - - </div> - <div class="aui-dropdown2-section"> - <ul> - <li> - <a href="/wm75/" id="profile-link">View profile</a> - </li> - <li> - <a href="/account/user/wm75/" id="account-link" data-ct="navbar.dropdown.manage_account">Bitbucket settings</a> - </li> - <li> - <a href="/account/user/wm75/addon-directory" id="account-addons" data-ct="navbar.dropdown.addons">Add-ons</a> - </li> - <li> - <a href="/account/notifications/" id="inbox-link">Inbox</a> - </li> - <li> - <a href="#general-invite" class="general-invite-link" id="general-invite-dropdown" data-module="components/general-invite">Invite a friend</a> - <script id="general-invite-template" type="text/html"> - -<div id="general-invite"> - <form class="aui invitation-form" id="general-invite-form" method="post" novalidate> - <div class="error aui-message hidden"> - <span class="aui-icon icon-error"></span> - <div class="message"></div> - </div> - <div class="field-group"> - <label for="id_general_email_address">Email address</label> - <input type="email" id="id_general_email_address" name="email-address" class="text long-field"> - </div> - </form> -</div> - - </script> - </li> - </ul> - </div> - <div class="aui-dropdown2-section"> - <ul> - <li> - - <a href="/account/signout/" id="log-out-link">Log out</a> - - </li> - </ul> - </div> - </nav> - </li> - -</ul> - - </div> - </div> - </nav> - </header> - - - - - -<header id="account-warning" role="banner" data-module="header/account-warning" - class="aui-message-banner warning - "> - <div class="aui-message-banner-inner"> - <span class="aui-icon aui-icon-warning"></span> - <span class="message"> - - </span> - </div> -</header> - - - - - -<header id="aui-message-bar"> - -</header> - - - <div id="content" role="main"> - - - - -<div class="aui-sidebar repo-sidebar" - data-module="repo/sidebar" - > - <div class="aui-sidebar-wrapper"> - <div class="aui-sidebar-body"> - <header class="aui-page-header"> - <div class="aui-page-header-inner"> - <div class="aui-page-header-image"> - <a href="/wm75/mimodd" id="repo-avatar-link" class="repo-link"> - <span class="aui-avatar aui-avatar-large aui-avatar-project"> - <span class="aui-avatar-inner"> - <img src="https://bitbucket.org/account/wm75/avatar/128/?ts=1461614693" alt=""> - </span> - </span> - </a> - </div> - <div class="aui-page-header-main"> - <h1> - - <span class="aui-icon aui-icon-small aui-iconfont-locked"></span> - - <a href="/wm75/mimodd" title="mimodd" class="entity-name">mimodd</a> - </h1> - </div> - </div> - </header> - <nav class="aui-navgroup aui-navgroup-vertical"> - <div class="aui-navgroup-inner"> - - - <div class="aui-sidebar-group aui-sidebar-group-actions repository-actions forks-enabled can-create"> - <div class="aui-nav-heading"> - <strong>Actions</strong> - </div> - <ul id="repo-actions" class="aui-nav"> - - - <li> - <a id="repo-clone-button" class="aui-nav-item " - href="#clone" - data-ct="sidebar.actions.repository.clone" - data-ct-data="" - data-module="components/clone/clone-dialog" - target="_self"> - - <span class="aui-icon aui-icon-large icon-clone"></span> - - <span class="aui-nav-item-label">Clone</span> - </a> - </li> - - <li> - <a id="repo-create-branch-link" class="aui-nav-item create-branch-button" - href="/wm75/mimodd/branch" - data-ct="sidebar.actions.repository.create_branch" - data-ct-data="" - data-module="repo/create-branch" - target="_self"> - - <span class="aui-icon aui-icon-large icon-create-branch"></span> - - <span class="aui-nav-item-label">Create branch</span> - </a> - </li> - - <li> - <a id="repo-create-pull-request-link" class="aui-nav-item " - href="/wm75/mimodd/pull-requests/new" - data-ct="sidebar.actions.create_pullrequest" - data-ct-data="" - - target="_self"> - - <span class="aui-icon aui-icon-large icon-create-pull-request"></span> - - <span class="aui-nav-item-label">Create pull request</span> - </a> - </li> - - <li> - <a id="repo-compare-link" class="aui-nav-item " - href="/wm75/mimodd/branches/compare" - data-ct="sidebar.actions.repository.compare" - data-ct-data="" - - target="_self"> - - <span class="aui-icon aui-icon-large aui-icon-small aui-iconfont-devtools-compare"></span> - - <span class="aui-nav-item-label">Compare</span> - </a> - </li> - - <li> - <a id="repo-fork-link" class="aui-nav-item " - href="/wm75/mimodd/fork" - data-ct="sidebar.actions.repository.fork" - data-ct-data="" - - target="_self"> - - <span class="aui-icon aui-icon-large icon-fork"></span> - - <span class="aui-nav-item-label">Fork</span> - </a> - </li> - - </ul> - </div> - - <div class="aui-sidebar-group aui-sidebar-group-tier-one repository-sections"> - <div class="aui-nav-heading"> - <strong>Navigation</strong> - </div> - <ul class="aui-nav"> - - - <li class="aui-nav-selected"> - <a id="repo-overview-link" class="aui-nav-item " - href="/wm75/mimodd/overview" - data-ct="sidebar.navigation.repository.overview" - data-ct-data="" - - target="_self" - > - - <span class="aui-icon aui-icon-large icon-overview"></span> - <span class="aui-nav-item-label">Overview</span> - </a> - </li> - - <li> - <a id="repo-source-link" class="aui-nav-item " - href="/wm75/mimodd/src" - data-ct="sidebar.navigation.repository.source" - data-ct-data="" - - target="_self" - > - - <span class="aui-icon aui-icon-large icon-source"></span> - <span class="aui-nav-item-label">Source</span> - </a> - </li> - - <li> - <a id="repo-commits-link" class="aui-nav-item " - href="/wm75/mimodd/commits/" - data-ct="sidebar.navigation.repository.commits" - data-ct-data="" - - target="_self" - > - - <span class="aui-icon aui-icon-large icon-commits"></span> - <span class="aui-nav-item-label">Commits</span> - </a> - </li> - - <li> - <a id="repo-branches-link" class="aui-nav-item " - href="/wm75/mimodd/branches/" - data-ct="sidebar.navigation.repository.branches" - data-ct-data="" - - target="_self" - > - - <span class="aui-icon aui-icon-large icon-branches"></span> - <span class="aui-nav-item-label">Branches</span> - </a> - </li> - - <li> - <a id="repo-pullrequests-link" class="aui-nav-item " - href="/wm75/mimodd/pull-requests/" - data-ct="sidebar.navigation.repository.pullrequests" - data-ct-data="" - - target="_self" - > - - <span class="aui-icon aui-icon-large icon-pull-requests"></span> - <span class="aui-nav-item-label">Pull requests</span> - </a> - </li> - - <li> - <a id="repo-downloads-link" class="aui-nav-item " - href="/wm75/mimodd/downloads" - data-ct="sidebar.navigation.repository.downloads" - data-ct-data="" - - target="_self" - > - - <span class="aui-icon aui-icon-large icon-downloads"></span> - <span class="aui-nav-item-label">Downloads</span> - </a> - </li> - - </ul> - </div> - <div class="aui-sidebar-group aui-sidebar-group-tier-one repository-settings"> - <div class="aui-nav-heading"> - <strong class="assistive">Settings</strong> - </div> - <ul class="aui-nav"> - - - <li> - <a id="repo-settings-link" class="aui-nav-item " - href="/wm75/mimodd/admin" - - target="_self" - > - - <span class="aui-icon aui-icon-large icon-settings"></span> - <span class="aui-nav-item-label">Settings</span> - </a> - </li> - - </ul> - </div> - - </div> - </nav> - </div> - <div class="aui-sidebar-footer"> - <a class="aui-sidebar-toggle aui-sidebar-footer-tipsy aui-button aui-button-subtle"><span class="aui-icon"></span></a> - </div> - </div> - - <script id="share-repo-template" type="text/html"> - - -<div class="clearfix"> - <span class="repository-avatar aui-avatar aui-avatar-project aui-avatar-medium "> - <span class="aui-avatar-inner"> - <img src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/repo-avatars/default.svg" class=" deferred-image" - data-src-url="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/repo-avatars/default.svg" data-src-url-2x="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/repo-avatars/default.svg" - > - </span> -</span> - - <span class="repo-name-container"> - wm75 / mimodd - </span> -</div> -<p class="helptext"> - - Existing users are granted access to this repository immediately. - New users will be sent an invitation. - -</p> -<div class="manage-repo-link" - data-manage-link="/wm75/mimodd/admin/access"></div> -<div class="share-form"></div> - - </script> - <script id="share-dialog-template" type="text/html"> - <div class="aui-tabs horizontal-tabs"> - <ul class="tabs-menu"> - [[#panels]] - <li class="menu-item"> - <a href="#[[tabId]]"><strong>[[display]]</strong></a> - </li> - [[/panels]] - </ul> - [[#panels]] - <div class="tabs-pane" id="[[tabId]]"></div> - [[/panels]] -</div> - - </script> - - <div id="repo-clone-dialog" class="clone-dialog hidden"> - - - <div class="clone-url" data-module="components/clone/url-dropdown"> - <div class="aui-buttons"> - <a href="https://wm75@bitbucket.org/wm75/mimodd" - class="aui-button aui-dropdown2-trigger" aria-haspopup="true" - aria-owns="clone-url-dropdown-header"> - <span class="dropdown-text">HTTPS</span> - </a> - <div id="clone-url-dropdown-header" - class="clone-url-dropdown aui-dropdown2 aui-style-default" - data-aui-alignment="bottom left"> - <ul class="aui-list-truncate"> - <li> - <a href="https://wm75@bitbucket.org/wm75/mimodd" - - data-command="hg clone https://wm75@bitbucket.org/wm75/mimodd" - - class="item-link https">HTTPS - </a> - </li> - <li> - <a href="ssh://hg@bitbucket.org/wm75/mimodd" - - data-command="hg clone ssh://hg@bitbucket.org/wm75/mimodd" - - class="item-link ssh">SSH - </a> - </li> - </ul> - </div> - <input type="text" readonly="readonly" class="clone-url-input" - value="hg clone https://wm75@bitbucket.org/wm75/mimodd"> - </div> - - <p>Need help cloning? Learn how to - <a href="https://confluence.atlassian.com/x/4whODQ" target="_blank">clone a repository</a>.</p> - -</div> - - <div class="sourcetree-callout clone-in-sourcetree" - data-module="components/clone/clone-in-sourcetree" - data-https-url="https://wm75@bitbucket.org/wm75/mimodd" - data-ssh-url="ssh://hg@bitbucket.org/wm75/mimodd"> - - <div> - <button class="aui-button aui-button-primary"> - - Clone in SourceTree - - </button> - </div> - - <p class="windows-text"> - - <a href="http://www.sourcetreeapp.com/?utm_source=internal&utm_medium=link&utm_campaign=clone_repo_win" target="_blank">Atlassian SourceTree</a> - is a free Git and Mercurial client for Windows. - - </p> - <p class="mac-text"> - - <a href="http://www.sourcetreeapp.com/?utm_source=internal&utm_medium=link&utm_campaign=clone_repo_mac" target="_blank">Atlassian SourceTree</a> - is a free Git and Mercurial client for Mac. - - </p> -</div> -</div> -</div> - - - - <div class="aui-page-panel "> - - - - <div class="aui-page-panel-inner"> - <div id="repo-content" class="aui-page-panel-content" - data-module="repo/index" - - > - - <ol class="aui-nav aui-nav-breadcrumbs"> - <li> - <a href="/wm75/">Wolfgang Maier</a> - </li> - - <li> - <a href="/wm75/mimodd">mimodd</a> - </li> -</ol> - - <div class="aui-group repo-page-header"> - <div class="aui-item section-title"> - <h1>Overview</h1> - </div> - <div class="aui-item page-actions"> - - <div class="aui-buttons" id="repo-clone-sourcetree"> - <button class="aui-button" id="repo-clone-sourcetree-trigger" - data-module="repo/overview/sourcetree-dialog" - title="Clone in SourceTree"> - <span class="aui-icon aui-icon-small aui-iconfont-devtools-clone">Clone in SourceTree</span> - </button> -</div> -<div id="repo-clone-sourcetree-dialog" class="hidden"> - - <div class="sourcetree-callout clone-in-sourcetree" - data-module="components/clone/clone-in-sourcetree" - data-https-url="https://wm75@bitbucket.org/wm75/mimodd" - data-ssh-url="ssh://hg@bitbucket.org/wm75/mimodd"> - - <div> - <button class="aui-button aui-button-primary"> - - Clone in SourceTree - - </button> - </div> - - <p class="windows-text"> - - <a href="http://www.sourcetreeapp.com/?utm_source=internal&utm_medium=link&utm_campaign=clone_repo_win" target="_blank">Atlassian SourceTree</a> - is a free Git and Mercurial client for Windows. - - </p> - <p class="mac-text"> - - <a href="http://www.sourcetreeapp.com/?utm_source=internal&utm_medium=link&utm_campaign=clone_repo_mac" target="_blank">Atlassian SourceTree</a> - is a free Git and Mercurial client for Mac. - - </p> -</div> -</div> - - - <div class="clone-url" data-module="components/clone/url-dropdown"> - <div class="aui-buttons"> - <a href="https://wm75@bitbucket.org/wm75/mimodd" - class="aui-button aui-dropdown2-trigger" aria-haspopup="true" - aria-owns="clone-url-dropdown-overview"> - <span class="dropdown-text">HTTPS</span> - </a> - <div id="clone-url-dropdown-overview" - class="clone-url-dropdown aui-dropdown2 aui-style-default" - data-aui-alignment="bottom left"> - <ul class="aui-list-truncate"> - <li> - <a href="https://wm75@bitbucket.org/wm75/mimodd" - - data-command="https://wm75@bitbucket.org/wm75/mimodd" - - class="item-link https">HTTPS - </a> - </li> - <li> - <a href="ssh://hg@bitbucket.org/wm75/mimodd" - - data-command="ssh://hg@bitbucket.org/wm75/mimodd" - - class="item-link ssh">SSH - </a> - </li> - </ul> - </div> - <input type="text" readonly="readonly" class="clone-url-input" - value="https://wm75@bitbucket.org/wm75/mimodd"> - </div> - -</div> - - - <a class="share aui-button" href="#share" id="repo-share-link" data-module="repo/share" - - > - <span class="aui-icon aui-icon-small aui-iconfont-share"></span> - <span class="aui-nav-item-label">Share</span> - </a> - - - - <div class="aui-buttons repo-watch" data-module="components/repo-watch/setup"> - <a class="aui-button follow following" rel="nofollow" - href="/wm75/mimodd/follow" - - title="Stop watching this repository" - - data-prefs-url="/xhr/watch-prefs/wm75/mimodd" - data-unwatch-url="/api/1.0/repositories/unwatch/wm75/mimodd" - data-url-pullrequests="/dashboard/pullrequests/watching" - data-url-issues="/dashboard/issues/watching" - data-repository="wm75/mimodd"> - <span class="icon watch text">Watch</span> - </a> - <a href="#repo-preferences" class="aui-button repo-watch"> - <span class="aui-icon-dropdown"></span> - </a> -</div> - <script id="watch-preferences-template" type="text/html"> - -<div id="repo-watch-preferences" class="repo-watch-container"> - <div class="row"> - <div class="content"> - <span class="aui-icon aui-icon-large aui-iconfont-view img-icon"></span> - [[#watching]] - <h2> - You are watching this repository - </h2> - <p> - - - Updates will appear in your <a href="/dashboard/overview">newsfeed</a>. - - </p> - [[/watching]] - [[^watching]] - <h2> - You are not watching this repository - </h2> - <p> - Start watching to receive updates. - </p> - [[/watching]] - <p> - <a class="aui-button follow following" - data-follow-text="Stop watching" href="#"> - [[#watching]] - Stop watching - [[/watching]] - [[^watching]] - Watch this repository - [[/watching]] - </a> - </p> - </div> - </div> - <div class="row"> - <div class="content" - [[^watching]] title="You must watch this repository before you can subscribe to its notifications"[[/watching]]> - <span class="aui-icon aui-icon-large aui-iconfont-email img-icon"></span> - <h4 class="subscribe-title"> - Subscribe to notifications about - </h4> - [[#showRepo]] - <div class="checkbox"> - <input type="checkbox" id="pref-pullrequests" name="pullrequests" [[#pullrequests]]checked[[/pullrequests]]/> - <label for="pref-pullrequests">All pull requests</label> - </div> - [[/showRepo]] - [[#showIssues]] - <div class="checkbox"> - <input type="checkbox" id="pref-issues" name="issues" [[#issues]]checked[[/issues]]/> - <label for="pref-issues">All issues</label> - </div> - [[/showIssues]] - [[#showRepo]] - <div class="checkbox"> - <input type="checkbox" id="pref-commits" name="commits" [[#commits]]checked[[/commits]]/> - <label for="pref-commits">All commits</label> - </div> - [[/showRepo]] - [[#showWiki]] - <div class="checkbox"> - <input type="checkbox" id="pref-wiki" name="wiki" [[#wiki]]checked[[/wiki]]/> - <label for="pref-wiki">All wiki changes</label> - </div> - [[/showWiki]] - [[#showRepo]] - <div class="checkbox"> - <input type="checkbox" id="pref-forks" name="forks" [[#forks]]checked[[/forks]]/> - <label for="pref-forks">All forks</label> - </div> - [[/showRepo]] - </div> - </div> -</div> - - </script> - <script id="stop-watching-template" type="text/html"> - - -<div id="stop-watching-container" - data-manage-all-url="/account/user/wm75/notifications/"> - <p> - - You may still get notifications from previously watched items in this - repository unless you unwatch them. - - </p> - <ul class="watching"> - [[#pr_count]] - <li> - <a href="[[urlPullrequests]]">Pull requests</a> - <span class="aui-badge">[[pr_count]]</span> - <a class="unwatch" href="#unwatch-pullrequests" data-kind="pullrequest"> - Unwatch - </a> - </li> - [[/pr_count]] - [[#issue_count]] - <li> - <a href="[[urlIssues]]">Issues</a> - <span class="aui-badge">[[issue_count]]</span> - <a class="unwatch" href="#unwatch-issues" data-kind="issues"> - Unwatch - </a> - </li> - [[/issue_count]] - </ul> -</div> - - </script> - <script id="preference-error-template" type="text/html"> - -<div class="aui-message error repo-watch"> - <p>An error has occurred.</p> - <span class="aui-icon aui-icon-small aui-iconfont-error"></span> -</div> - - </script> - - - </div> - </div> - - <div id="repo-overview" class="aui-group" - data-module="repo/overview/index" - data-admin-url="/wm75/mimodd/admin/hipchat-integration"> - - - <div class="aui-item"> - <div id="repo-info" class="aui-group"> - <div class="aui-item repo-metadata-container"> - <dl class="repo-metadata"> - <dt>Last updated</dt> - - <dd title="19 seconds ago"> - <time datetime="2016-04-25T21:26:13.076300">19 seconds ago</time> - </dd> - - - - - - <dt>Language</dt> - <dd title="XML"> - - XML - - </dd> - - <dt>Access level</dt> - - - - - <dd> - - <span title="You have admin access">Admin</span> - - - </dd> - - </dl> - </div> - <div class="aui-item repo-stats-container" id="repo-stats" data-module="repo/overview/repo-stats"> - <ul class="stats"> - - - - <li class="branches"> - <a href="#branches" id="branches-dialog-trigger" - data-module="repo/overview/filterable-list-dialog" - title="View branches in this repository" - data-url="/api/1.0/repositories/wm75/mimodd/branches-tags" - data-template="branches-overview-template"> - <span class="value">1</span> - - Branch - - </a> - </li> - <li class="tags"> - <a href="#tags" id="tags-dialog-trigger" - data-module="repo/overview/filterable-list-dialog" - title="View tags in this repository" - data-url="/api/1.0/repositories/wm75/mimodd/branches-tags" - data-template="tags-overview-template"> - <span class="value">1</span> - - Tag - - </a> - </li> - <li class="forks"> - <a href="#forks" id="forks-dialog-trigger" - data-module="repo/overview/filterable-list-dialog" - title="View forks of this repository" - data-url="/api/1.0/repositories/wm75/mimodd/forks" - data-template="forks-overview-template"> - <span class="value">0</span> - - Forks - - </a> - </li> - <li class="followers"> - - <a href="#followers" id="followers-dialog-trigger" - data-module="repo/overview/followers-dialog" - title="View watchers of this repository" - data-url="/api/1.0/repositories/wm75/mimodd/followers" - data-template="watchers-overview-template"> - <span class="value">1</span> - - Watcher - - </a> - </li> - </ul> - - <script id="branches-overview-template" type="text/html"> - - -<div class="tabbed-filter-widget repo-stats-dialog branches" id="branches-dialog"> - <div class="tabbed-filter"> - <input placeholder="Filter branches" class="filter-box" autosave="branch-dropdown-18108127" type="text"> - </div> - <div class="tab-pane active-pane branches" id="branch-list"> - <ol class="filter-list[[^branches]] empty[[/branches]]"> - <li class="empty-msg">No matching branches</li> - [[#branches]] - <li class="comprev filter-item"> - <a href="/wm75/mimodd/branch/[[encodedName]]" - class="filter-item-link" title="View details for [[name]]">[[name]]</a> - </li> - [[/branches]] - </ol> - </div> -</div> - - </script> - <script id="tags-overview-template" type="text/html"> - - -<div class="tabbed-filter-widget repo-stats-dialog tags" id="tags-dialog"> - <div class="tabbed-filter"> - <input placeholder="Filter tags" class="filter-box" autosave="tag-dropdown-18108127" type="text"> - </div> - <div class="tab-pane active-pane tags" id="tag-list"> - <ol class="filter-list[[^tags]] empty[[/tags]]"> - <li class="empty-msg">No matching tags</li> - [[#tags]] - <li class="comprev filter-item"> - <a href="/wm75/mimodd/commits/tag/[[encodedName]]" - class="filter-item-link" title="Browse source of [[name]]">[[name]]</a> - <a rel="nofollow" class="compare" - href="/wm75/mimodd/branches/compare/[[encodedName]].." - title="Show changes between [[name]] and the main branch.">Compare</a> - </li> - [[/tags]] - </ol> - </div> -</div> - - </script> - <script id="forks-overview-template" type="text/html"> - - -<div class="tabbed-filter-widget repo-stats-dialog forks" id="forks-dialog"> - <div class="tabbed-filter"> - <input placeholder="Filter forks" class="filter-box" autosave="fork-dropdown-18108127" type="text"> - </div> - <div class="tab-pane active-pane forks" id="fork-list"> - <ol class="filter-list[[^forks]] empty[[/forks]]"> - <li class="empty-msg">No matching forks</li> - [[#forks]] - <li class="comprev filter-item"> - <a href="/[[owner.username]]/[[slug]]" - class="filter-item-link" title="[[owner.username]]/[[slug]]">[[owner.username]]/[[slug]]</a> - <a rel="nofollow" class="compare" - href="/wm75/mimodd/branches/compare/[[owner.username]]/[[slug]].." - title="Show changes between [[owner.username]]/[[slug]] and this repository.">Compare</a> - </li> - [[/forks]] - </ol> - </div> -</div> - - </script> - <script id="watchers-overview-template" type="text/html"> - - -<div class="followers-dialog repo-stats-dialog" id="followers-dialog"> - <div id="followers-list" class="followers-list"> - <ol[[^followers]] class="empty"[[/followers]]> - <li class="empty-msg">No watchers yet</li> - [[#followers]] - <li> - <a href="/[[username]]/" title="[[display_name]]"> - <span class="aui-avatar aui-avatar-medium"> - <span class="aui-avatar-inner"> - <img src="[[avatar]]"> - </span> - </span> - </a> - </li> - [[/followers]] - </ol> - </div> -</div> - - </script> - </div> - </div> - - - - <div id="readme" class="maskable has-edit-access"> - - <div class="blank-slate-subtle blank-slate-readme"> - <h1> - There isn't a README yet - </h1> - <p> - - - Create one and tell people where to start and how to contribute. - - - </p> - - - <p> - <a href="/wm75/mimodd/edit-readme" class="aui-button" data-module="repo/editor/readme-edit-button"> - Create a README - </a> - </p> - - </div> - - </div> - </div> - - <div class="aui-item sidebar"> - - - - - <section id="invite-repo-box" class="dismissable-ad" data-module="repo/overview/repo-invite"> - <a class="close" data-repo-id="18108127" title="Dismiss this banner" href="#dismiss"> - <span class="aui-icon aui-icon-small aui-iconfont-close-dialog">Dismiss this banner</span> - </a> - <h1>Invite users to this repo</h1> - <div class="buttons"> - <a class="share aui-button aui-button-primary" href="#invite-repo">Send invitation</a> - </div> - </section> - - - - <section id="repo-activity" class="activity"> - <h2> - Recent activity - - <a href="/wm75/mimodd/rss?token=141fac808381789e181d67dda14ad78c" - title="Subscribe to activity updates for this repository" - class="subscribe"> - <span class="aui-icon aui-icon-small aui-iconfont-rss rss-icon"></span> - </a> - </h2> - - - <div class="newsfeed"> - - - - -<article class="news-item cset_like" data-author="wm75"> - - <a href="/wm75/"> - <div class="aui-avatar aui-avatar-small"> - <div class="aui-avatar-inner"> - <img alt="Wolfgang Maier" src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/default_avatar/user_blue.svg" class="deferred-image" data-src-url="https://bitbucket.org/account/wm75/avatar/48/?ts=1461614693" data-src-url-2x="https://bitbucket.org/account/wm75/avatar/96/?ts=1461614693"> - </div> - </div> - </a> - - - <div class="news-item-title"> - - - <a href="/wm75/mimodd/commits/6378f708905770580a9707a9afe7a6a0#comment-None" class="changeset-hash">6378f70</a> - - - </div> - <div class="news-item-description"> - - Changeset <span class="changeset-hash">6378f70</span> approved in - - <a href="/wm75/mimodd" title="wm75/mimodd"> - wm75/mimodd - </a> - - - </div> - - <div class="news-item-info"> - - - - - - <a href="/wm75/">Wolfgang Maier</a> - - · - <time datetime="2016-04-25T21:26:13+00:00"></time> - </div> -</article> - - - - - -<article class="news-item pushed" data-author="wm75"> - - <a href="/wm75/"> - <div class="aui-avatar aui-avatar-small"> - <div class="aui-avatar-inner"> - <img alt="Wolfgang Maier" src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/default_avatar/user_blue.svg" class="deferred-image" data-src-url="https://bitbucket.org/account/wm75/avatar/48/?ts=1461614693" data-src-url-2x="https://bitbucket.org/account/wm75/avatar/96/?ts=1461614693"> - </div> - </div> - </a> - - - <div class="news-item-title"> - - - - - <a href="/wm75/mimodd/commits/6378f708905770580a9707a9afe7a6a09af1b527">1 commit</a> - - - </div> - <div class="news-item-description"> - - Pushed to - - <a href="/wm75/mimodd" title="wm75/mimodd"> - wm75/mimodd - </a> - - - </div> - - <div class="changesets"> - - <div class="changeset"> - - <a href="/wm75/mimodd/commits/6378f708905770580a9707a9afe7a6a09af1b527" class="changeset-hash">6378f70</a> - - - full install including R and rpy2 for plotting - - - </div> - - - </div> - - <div class="news-item-info"> - - - - - - <a href="/wm75/">Wolfgang Maier</a> - - · - <time datetime="2016-04-25T21:02:46+00:00"></time> - </div> -</article> - - - - - -<article class="news-item import" data-author="wm75"> - - <a href="/wm75/"> - <div class="aui-avatar aui-avatar-small"> - <div class="aui-avatar-inner"> - <img alt="Wolfgang Maier" src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/img/default_avatar/user_blue.svg" class="deferred-image" data-src-url="https://bitbucket.org/account/wm75/avatar/48/?ts=1461614693" data-src-url-2x="https://bitbucket.org/account/wm75/avatar/96/?ts=1461614693"> - </div> - </div> - </a> - - - <div class="news-item-title"> - - - - <a href="/wm75/mimodd" title="wm75/mimodd"> - wm75/mimodd - </a> - - - </div> - <div class="news-item-description"> - - Repository imported - - </div> - - <div class="news-item-info"> - - - - - - <a href="/wm75/">Wolfgang Maier</a> - - · - <time datetime="2016-04-25T20:11:43+00:00"></time> - </div> -</article> - - - </div> - - - </section> - </div> - </div> - - - - - - - - - - - - <script id="image-upload-template" type="text/html"> - - -<form id="upload-image" method="POST" - - action="/xhr/wm75/mimodd/image-upload/" - > - - - <div class="drop-target"> - <p class="centered">Drag image here</p> - </div> - - - <div> - <button class="aui-button click-target">Select an image</button> - <input name="file" type="file" class="hidden file-target" - accept="image/jpeg, image/gif, image/png" /> - <input type="submit" class="hidden"> - </div> -</form> - - - </script> - - </div> - </div> - </div> - - </div> - </div> - - <footer id="footer" role="contentinfo" data-module="components/footer"> - <section class="footer-body"> - - <ul> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="Blog" - href="http://blog.bitbucket.org">Blog</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="Home" - href="/support">Support</a> - </li> - <li> - <a class="support-ga" - data-support-gaq-page="PlansPricing" - href="/plans">Plans & pricing</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="DocumentationHome" - href="//confluence.atlassian.com/display/BITBUCKET">Documentation</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="DocumentationAPI" - href="//confluence.atlassian.com/x/IYBGDQ">API</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="SiteStatus" - href="http://status.bitbucket.org/">Site status</a> - </li> - <li> - <a class="support-ga" id="meta-info" - data-support-gaq-page="MetaInfo" - href="#">Version info</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="EndUserAgreement" - href="//www.atlassian.com/legal/customer-agreement?utm_source=bitbucket&utm_medium=link&utm_campaign=footer">Terms of service</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="PrivacyPolicy" - href="//www.atlassian.com/legal/privacy-policy">Privacy policy</a> - </li> -</ul> -<div id="meta-info-content" style="display: none;"> - <ul> - - <li><a href="/account/user/wm75/" class="view-language-link">English</a></li> - - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="GitDocumentation" - href="http://git-scm.com/">Git 2.7.4.1.g5468f9e</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="HgDocumentation" - href="https://www.mercurial-scm.org">Mercurial 3.6.3</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="DjangoDocumentation" - href="https://www.djangoproject.com/">Django 1.7.11</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="PythonDocumentation" - href="http://www.python.org/">Python 2.7.9</a> - </li> - <li> - <a class="support-ga" target="_blank" - data-support-gaq-page="DeployedVersion" - href="#">7a67f664098b / 7a67f664098b @ app-107</a> - </li> - </ul> -</div> -<ul class="atlassian-links"> - <li> - <a id="atlassian-jira-link" target="_blank" - title="Track everything – bugs, tasks, deadlines, code – and pull reports to stay informed." - href="https://www.atlassian.com/software/jira/bitbucket-integration?utm_source=bitbucket&utm_medium=link&utm_campaign=bitbucket_footer">JIRA</a> - </li> - <li> - <a id="atlassian-confluence-link" target="_blank" - title="Content Creation, Collaboration & Knowledge Sharing for Teams." - href="http://www.atlassian.com/software/confluence/overview/team-collaboration-software?utm_source=bitbucket&utm_medium=link&utm_campaign=bitbucket_footer">Confluence</a> - </li> - <li> - <a id="atlassian-bamboo-link" target="_blank" - title="Continuous integration and deployment, release management." - href="http://www.atlassian.com/software/bamboo?utm_source=bitbucket&utm_medium=link&utm_campaign=bitbucket_footer">Bamboo</a> - </li> - <li> - <a id="atlassian-sourcetree-link" target="_blank" - title="A free Git and Mercurial desktop client for Mac or Windows." - href="http://www.sourcetreeapp.com/?utm_source=bitbucket&utm_medium=link&utm_campaign=bitbucket_footer">SourceTree</a> - </li> - <li> - <a id="atlassian-hipchat-link" target="_blank" - title="Group chat and IM built for teams." - href="http://www.hipchat.com/?utm_source=bitbucket&utm_medium=link&utm_campaign=bitbucket_footer">HipChat</a> - </li> -</ul> -<div id="footer-logo"> - <a target="_blank" - title="Bitbucket is developed by Atlassian in San Francisco and Austin." - href="http://www.atlassian.com?utm_source=bitbucket&utm_medium=logo&utm_campaign=bitbucket_footer">Atlassian</a> -</div> - - </section> - </footer> -</div> - - - - - - -<script src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/jsi18n/en/djangojs.js"></script> -<script src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/dist/webpack/vendor.js"></script> -<script src="https://d3oaxc4q5k2d6q.cloudfront.net/m/7a67f664098b/dist/webpack/app.js"></script> - - -<script> - (function () { - var ga = document.createElement('script'); - ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js'; - ga.setAttribute('async', 'true'); - var s = document.getElementsByTagName('script')[0]; - s.parentNode.insertBefore(ga, s); - }()); -</script> - - - - -<div data-module="components/mentions/index"> - <script id="mention-result" type="text/html"> - -<span class="mention-result"> - <span class="aui-avatar aui-avatar-small mention-result--avatar"> - <span class="aui-avatar-inner"> - <img src="[[avatar_url]]"> - </span> - </span> - [[#display_name]] - <span class="display-name mention-result--display-name">[[&display_name]]</span> <small class="username mention-result--username">[[&username]]</small> - [[/display_name]] - [[^display_name]] - <span class="username mention-result--username">[[&username]]</span> - [[/display_name]] - [[#is_teammate]][[^is_team]] - <span class="aui-lozenge aui-lozenge-complete aui-lozenge-subtle mention-result--lozenge">teammate</span> - [[/is_team]][[/is_teammate]] -</span> - </script> - <script id="mention-call-to-action" type="text/html"> - -[[^query]] -<li class="bb-typeahead-item">Begin typing to search for a user</li> -[[/query]] -[[#query]] -<li class="bb-typeahead-item">Continue typing to search for a user</li> -[[/query]] - - </script> - <script id="mention-no-results" type="text/html"> - -[[^searching]] -<li class="bb-typeahead-item">Found no matching users for <em>[[query]]</em>.</li> -[[/searching]] -[[#searching]] -<li class="bb-typeahead-item bb-typeahead-searching">Searching for <em>[[query]]</em>.</li> -[[/searching]] - - </script> -</div> -<div data-module="components/typeahead/emoji/index"> - <script id="emoji-result" type="text/html"> - -<div class="aui-avatar aui-avatar-small"> - <div class="aui-avatar-inner"> - <img src="[[src]]"> - </div> -</div> -<span class="name">[[&name]]</span> - - </script> -</div> - -<div data-module="components/repo-typeahead/index"> - <script id="repo-typeahead-result" type="text/html"> - <span class="aui-avatar aui-avatar-project aui-avatar-xsmall"> - <span class="aui-avatar-inner"> - <img src="[[avatar]]"> - </span> -</span> -<span class="owner">[[&owner]]</span>/<span class="slug">[[&slug]]</span> - - </script> -</div> -<script id="share-form-template" type="text/html"> - - -<div class="error aui-message hidden"> - <span class="aui-icon icon-error"></span> - <div class="message"></div> -</div> -<form class="aui"> - <table class="widget bb-list aui"> - <thead> - <tr class="assistive"> - <th class="user">User</th> - <th class="role">Role</th> - <th class="actions">Actions</th> - </tr> - </thead> - <tbody> - <tr class="form"> - <td colspan="2"> - <input type="text" class="text bb-user-typeahead user-or-email" - placeholder="Username or email address" - autocomplete="off" - data-bb-typeahead-focus="false" - [[#disabled]]disabled[[/disabled]]> - </td> - <td class="actions"> - <button type="submit" class="aui-button aui-button-light" disabled>Add</button> - </td> - </tr> - </tbody> - </table> -</form> - - </script> -<script id="share-detail-template" type="text/html"> - - -[[#username]] -<td class="user - [[#hasCustomGroups]]custom-groups[[/hasCustomGroups]]" - [[#error]]data-error="[[error]]"[[/error]]> - <div title="[[displayName]]"> - <a href="/[[username]]/" class="user"> - <span class="aui-avatar aui-avatar-xsmall"> - <span class="aui-avatar-inner"> - <img src="[[avatar]]"> - </span> - </span> - <span>[[displayName]]</span> - </a> - </div> -</td> -[[/username]] -[[^username]] -<td class="email - [[#hasCustomGroups]]custom-groups[[/hasCustomGroups]]" - [[#error]]data-error="[[error]]"[[/error]]> - <div title="[[email]]"> - <span class="aui-icon aui-icon-small aui-iconfont-email"></span> - [[email]] - </div> -</td> -[[/username]] -<td class="role - [[#hasCustomGroups]]custom-groups[[/hasCustomGroups]]"> - <div> - [[#group]] - [[#hasCustomGroups]] - <select class="group [[#noGroupChoices]]hidden[[/noGroupChoices]]"> - [[#groups]] - <option value="[[slug]]" - [[#isSelected]]selected[[/isSelected]]> - [[name]] - </option> - [[/groups]] - </select> - [[/hasCustomGroups]] - [[^hasCustomGroups]] - <label> - <input type="checkbox" class="admin" - [[#isAdmin]]checked[[/isAdmin]]> - Administrator - </label> - [[/hasCustomGroups]] - [[/group]] - [[^group]] - <ul> - <li class="permission aui-lozenge aui-lozenge-complete - [[^read]]aui-lozenge-subtle[[/read]]" - data-permission="read"> - read - </li> - <li class="permission aui-lozenge aui-lozenge-complete - [[^write]]aui-lozenge-subtle[[/write]]" - data-permission="write"> - write - </li> - <li class="permission aui-lozenge aui-lozenge-complete - [[^admin]]aui-lozenge-subtle[[/admin]]" - data-permission="admin"> - admin - </li> - </ul> - [[/group]] - </div> -</td> -<td class="actions - [[#hasCustomGroups]]custom-groups[[/hasCustomGroups]]"> - <div> - <a href="#" class="delete"> - <span class="aui-icon aui-icon-small aui-iconfont-remove">Delete</span> - </a> - </div> -</td> - - </script> -<script id="share-team-template" type="text/html"> - - -<div class="clearfix"> - <span class="team-avatar-container"> - <span class="aui-avatar aui-avatar-medium"> - <span class="aui-avatar-inner"> - <img src="[[avatar]]"> - </span> - </span> - </span> - <span class="team-name-container"> - [[display_name]] - </span> -</div> -<p class="helptext"> - - Existing users are granted access to this team immediately. - New users will be sent an invitation. - -</p> -<div class="share-form"></div> - - </script> -<script id="scope-list-template" type="text/html"> - <ul class="scope-list"> - [[#scopes]] - <li class="scope-list--item"> - <span class="scope-list--icon aui-icon aui-icon-small [[icon]]"></span> - <span class="scope-list--description">[[description]]</span> - </li> - [[/scopes]] -</ul> - - </script> - - - <aui-inline-dialog - id="help-menu-dialog" - data-aui-alignment="bottom right" - - - data-aui-alignment-static="true" - data-module="header/help-menu" - responds-to="toggle" - aria-hidden="true"> - - <div id="help-menu-section"> - <h1 class="help-menu-heading">Help</h1> - - <form id="help-menu-search-form" class="aui" target="_blank" method="get" - action="https://support.atlassian.com/customer/search"> - <span id="help-menu-search-icon" class="aui-icon aui-icon-large aui-iconfont-search"></span> - <input id="help-menu-search-form-input" name="q" class="text" type="text" placeholder="Ask a question"> - </form> - - <ul id="help-menu-links"> - <li> - <a class="support-ga" data-support-gaq-page="DocumentationHome" - href="https://confluence.atlassian.com/x/bgozDQ" target="_blank"> - Online help - </a> - </li> - <li> - <a class="support-ga" data-support-gaq-page="GitTutorials" - href="https://www.atlassian.com/git?utm_source=bitbucket&utm_medium=link&utm_campaign=help_dropdown&utm_content=learn_git" - target="_blank"> - Learn Git - </a> - </li> - <li> - <a id="keyboard-shortcuts-link" - href="#">Keyboard shortcuts</a> - </li> - <li> - <a href="/whats-new/" id="features-link"> - Latest features - </a> - </li> - <li> - <a class="support-ga" data-support-gaq-page="DocumentationTutorials" - href="https://confluence.atlassian.com/x/Q4sFLQ" target="_blank"> - Bitbucket tutorials - </a> - </li> - <li> - <a class="support-ga" data-support-gaq-page="SiteStatus" - href="http://status.bitbucket.org/" target="_blank"> - Site status - </a> - </li> - <li> - <a class="support-ga" data-support-gaq-page="Home" href="/support"> - Support - </a> - </li> - </ul> - </div> -</aui-inline-dialog> - - - - <div class="omnibar" data-module="components/omnibar/index"> - <form class="omnibar-form aui"></form> - </div> - <script id="omnibar-form-template" type="text/html"> - <div class="omnibar-input-container"> - <input class="omnibar-input" type="text"> -</div> -<ul class="omnibar-result-group-list"></ul> - - </script> - <script id="omnibar-blank-slate-template" type="text/html"> - - -<div class="omnibar-blank-slate">No results found</div> - - </script> - <script id="omnibar-result-group-list-item-template" type="text/html"> - <div class="omnibar-result-group-header clearfix"> - <h2 class="omnibar-result-group-label" title="[[label]]">[[label]]</h2> - <span class="omnibar-result-group-context" title="[[context]]">[[context]]</span> -</div> -<ul class="omnibar-result-list unstyled-list"></ul> - - </script> - <script id="omnibar-result-list-item-template" type="text/html"> - [[#url]] - <a href="[[&url]]" class="omnibar-result-label">[[&label]]</a> -[[/url]] -[[^url]] - <span class="omnibar-result-label">[[&label]]</span> -[[/url]] -[[#context]] - <span class="omnibar-result-context">[[context]]</span> -[[/context]] - - </script> - - - -<script type="text/javascript">window.NREUM||(NREUM={});NREUM.info={"beacon":"bam.nr-data.net","queueTime":0,"licenseKey":"a2cef8c3d3","agent":"","transactionName":"Z11RZxdWW0cEVkYLDV4XdUYLVEFdClsdAAtEWkZQDlJBGgRFQhFMQl1DXFcZQ10AQkFYDlFWV1oLUA==","applicationID":"1841284","errorBeacon":"bam.nr-data.net","applicationTime":190}</script> -</body> -</html> \ No newline at end of file
--- a/tool_dependencies.xml Mon Apr 25 17:26:32 2016 -0400 +++ b/tool_dependencies.xml Mon Apr 25 17:27:25 2016 -0400 @@ -3,6 +3,12 @@ <package name="zlib" version="1.2.8"> <repository changeset_revision="dce22a65bac2" name="package_zlib_1_2_8" owner="wolma" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> + <package name="R" version="3.2.1"> + <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> + <package name="readline" version="6.2"> + <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> <package name="python3" version="3.4.1"> <repository changeset_revision="1c337560fa56" name="package_python3_zlib_dependent_1_0" owner="wolma" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> @@ -10,27 +16,50 @@ <package name="mimodd" version="0.1.7.2"> <install version="1.0"> <actions> - <action type="download_by_url">http://sourceforge.net/projects/mimodd/files/MiModD-0.1.7.2.tar.gz</action> + <!-- prepare a python3 venv to install into --> <action type="set_environment_for_install"> <repository changeset_revision="1c337560fa56" name="package_python3_zlib_dependent_1_0" owner="wolma" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="python3" version="3.4.1" /> </repository> </action> + <action type="shell_command">python3 -m venv --without-pip $INSTALL_DIR/MiModD_venv</action> + <!-- remove the plain python symlink from the venv to avoid its + accidental use by Galaxy, MiModD uses python3 explicitly --> + <action type="shell_command">rm $INSTALL_DIR/MiModD_venv/bin/python</action> + <action type="shell_command">. $INSTALL_DIR/MiModD_venv/bin/activate</action> + + <!-- download and install rpy2 --> + <action sha256sum="0d88f7fff21fbef523c8678ed8f850a36052edca4ce702c62f234fdcb52de441" type="download_by_url"> + https://depot.galaxyproject.org/software/rpy2/rpy2_2.7.5_src_all.tar.gz + </action> + <action type="set_environment_for_install"> + <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> + <package name="readline" version="6.2" /> + </repository> + <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> + <package name="R" version="3.2.1" /> + </repository> + </action> + <action type="shell_command"> + export LDFLAGS="-L$READLINE_LIB_PATH -lreadline" && + export CPPFLAGS="-I$READLINE_INCLUDE_PATH" && + python3 setup.py install + </action> + <action type="change_directory">$TMP_WORK_DIR</action> + + <!-- download and install MiModD --> + <action type="download_by_url">http://sourceforge.net/projects/mimodd/files/MiModD-0.1.7.2.tar.gz</action> <action type="set_environment_for_install"> <repository changeset_revision="dce22a65bac2" name="package_zlib_1_2_8" owner="wolma" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="zlib" version="1.2.8" /> </repository> </action> - <action type="shell_command">pyvenv --without-pip $INSTALL_DIR/MiModD_venv</action> - <!-- remove the plain python symlink from the venv to avoid its - accidental use by Galaxy, MiModD uses python3 explicitly --> - <action type="shell_command">rm $INSTALL_DIR/MiModD_venv/bin/python</action> <!-- install MiModD placing the entry script mimodd into the venv's bin directory --> - <action type="shell_command">$INSTALL_DIR/MiModD_venv/bin/python3 setup.py install</action> + <action type="shell_command">python3 setup.py install</action> <!-- make MiModD's wrapped binaries executable --> - <action type="shell_command">chmod 755 $INSTALL_DIR/MiModD_venv/lib/python3.4/site-packages/MiModD/bin/*</action> + <action type="chmod"><file mode="755">$INSTALL_DIR/MiModD_venv/lib/python3.4/site-packages/MiModD/bin/*</file></action> <!-- run MiModD's __first_run__ module once to give the package a chance to configure itself --> - <action type="shell_command">$INSTALL_DIR/MiModD_venv/bin/python3 -m MiModD.__first_run__</action> + <action type="shell_command">python3 -m MiModD.__first_run__</action> <action type="set_environment"> <!-- make the mimodd entry script discoverable --> @@ -42,7 +71,6 @@ <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[LD_LIBRARY_PATH]</environment_variable> </action> - </actions> </install> <readme>