annotate tools/data_source/import.xml @ 0:9071e359b9a3

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<tool id="Featured datasets4" name="Featured datasets">
  <description>(PSU prepared queries)</description>
  <command interpreter="python">import.py $data $output</command>
  <inputs>
	<display>$data</display>		
	<param name="data" type="select" display="radio">
      <option value="eryth">Erythroid predicted cis-regulatory modules</option>
      <option value="exons">Exons of protein-coding genes in the mouse genome, assembly mm3</option>
      <option value="cishg16 ">Known cis-regulatory modules in the human HBB gene complex (hg16)</option>
      <option value="cishg17">Known cis-regulatory modules in the human HBB gene complex (hg17)</option>
      <option value="krhg16">Known regulatory regions (hg16)</option>
      <option value="krhg17">Known regulatory regions (hg17)</option>
      <option value="tARhg16mmc">Human (hg16) evolutionary cold region (vs mouse)</option>
      <option value="tARhg16mmm">Human (hg16) evolutionary medium region (vs mouse)</option>
      <option value="tARhg16mmh">Human (hg16) evolutionary hot region (vs mouse)</option>
      <option value="tARhg16rnc">Human (hg16) evolutionary cold region (vs rat)</option>
      <option value="tARhg16rnm">Human (hg16) evolutionary medium region (vs rat)</option>
      <option value="tARhg16rnh">Human (hg16) evolutionary hot region (vs rat)</option>
      <option value="phastConsHg16">phastCons hg16 (stringent, top ~5%) from UCSC</option>
      <option value="omimhg16">OMIM disorders (hg16)</option>
      <option value="omimhg17">OMIM disorders (hg17)</option>
    </param>
  </inputs>
  <outputs>
    <data format="bed" name="output" />
  </outputs>
</tool>