Mercurial > repos > xuebing > tab_collapse

changeset 0:8c992303067a

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Uploaded
author xuebing
date Sat, 31 Mar 2012 14:11:12 -0400
parents
children 7ae45c21ef71
files tab_collapse.xml
diffstat 1 files changed, 19 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tab_collapse.xml	Sat Mar 31 14:11:12 2012 -0400
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+<tool id="tab_collapse" name="tab_collapse">
+  <description>collapse tabular files</description>
+  <command interpreter="python">tab_collapse.py $input $key $max > $outfile </command>
+  <inputs>
+    <param name="input" format="tabular" type="data" label="Original file"/>
+    <param name="key" size="10" type="text" value="1,2,3" label="key column(s)" help="columns to define unique rows" />
+    <param name="max" size="10" type="text" value="5" label="for lines with identical key, keep the one with max value in this column" help="need to be numeric" />
+    </inputs>
+  <outputs>
+    <data format="input" name="outfile" />
+  </outputs>
+  <help>
+
+**What it does**
+
+Similar to 'Group' but returns the entire line.  
+
+  </help>
+</tool>