Mercurial > repos > yating-l > rename_tracks

annotate test-data/StringTie_assembled_transcripts.gtf @ 0:8b19a698d90e draft

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planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
author yating-l
date Mon, 25 Jun 2018 15:01:41 -0400
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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1 # stringtie /home/galaxy/galaxy/database/files/000/dataset_328.dat -o /home/galaxy/galaxy/database/files/000/dataset_332.dat -p 1
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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2 # StringTie version 1.2.3
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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3 contig16 StringTie transcript 1751 17824 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "14.618678"; FPKM "322160.531250"; TPM "866155.937500";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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4 contig16 StringTie exon 1751 1897 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "6.787892";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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5 contig16 StringTie exon 11285 11463 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "19.860081";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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6 contig16 StringTie exon 11518 11705 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "23.926477";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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7 contig16 StringTie exon 11759 11858 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "4"; cov "17.452721";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
diff changeset
8 contig16 StringTie exon 11922 11975 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "5"; cov "11.461867";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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9 contig16 StringTie exon 12601 12811 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "6"; cov "11.876496";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
diff changeset
10 contig16 StringTie exon 17222 17337 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "7"; cov "15.915709";
8b19a698d90e planemo upload commit b615ca3bfed9f2115f62d1af30d4726fe8ba08d8
yating-l
parents:
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11 contig16 StringTie exon 17406 17824 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "8"; cov "11.738873";