Mercurial > repos > yating-l > ucsc_blat
view test-data/dbia3/dbia3_masked.sorted.psl @ 14:b8fa39b09aa4 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc_blat/ commit 639d331c388694a4143a4feea80870953282286e
| author | iuc |
|---|---|
| date | Mon, 28 Oct 2024 07:10:47 +0000 |
| parents | 2a89f630fa85 |
| children |
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psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig14 45010 22563 22611 1 48, 1838, 22563, 39 9 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig65 45013 12112 12160 1 48, 1838, 12112, 39 9 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig64 40016 32121 32169 1 48, 1838, 32121, 39 9 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig63 55021 47126 47174 1 48, 1838, 47126, 41 7 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig54 35008 7523 7571 1 48, 1838, 7523, 41 7 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig54 35008 1858 1906 1 48, 1838, 1858, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig54 35008 29934 29982 1 48, 1838, 29934, 41 7 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig53 50013 27528 27576 1 48, 1838, 27528, 41 7 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig53 50013 21863 21911 1 48, 1838, 21863, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig52 40012 1146 1194 1 48, 1838, 1146, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig51 50015 31154 31202 1 48, 1838, 31154, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig50 40009 30606 30654 1 48, 1838, 30606, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig39 45019 20340 20388 1 48, 1838, 20340, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig39 45019 7999 8047 1 48, 1838, 7999, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig38 50017 35343 35391 1 48, 1838, 35343, 58 11 0 0 1 192 1 765 ++ FBtr0070075 2430 1838 2099 contig31 40012 1075 1909 2 48,21, 1838,2078, 1075,1888, 58 11 0 0 1 192 1 765 ++ FBtr0070075 2430 1838 2099 contig30 70018 41082 41916 2 48,21, 1838,2078, 41082,41895, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig26 40013 1850 1898 1 48, 1838, 1850, 39 9 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig26 40013 1607 1655 1 48, 1838, 1607, 41 7 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig25 75023 61212 61260 1 48, 1838, 61212, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig25 75023 51865 51913 1 48, 1838, 51865, 39 9 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig25 75023 51622 51670 1 48, 1838, 51622, 40 8 0 0 0 0 0 0 ++ FBtr0070075 2430 1838 1886 contig13 45015 37571 37619 1 48, 1838, 37571, 38 7 0 0 0 0 0 0 ++ FBtr0300326 4823 2798 2843 contig60 50013 39781 39826 1 45, 2798, 39781, 68 16 0 0 1 231 1 292 ++ FBtr0300326 4823 2538 2853 contig58 50011 15076 15452 2 27,57, 2538,2796, 15076,15395, 46 11 0 0 0 0 0 0 ++ FBtr0300326 4823 2796 2853 contig57 60013 40402 40459 1 57, 2796, 40402, 39 9 0 0 0 0 0 0 ++ FBtr0300326 4823 2805 2853 contig57 60013 14909 14957 1 48, 2805, 14909, 62 13 0 0 1 224 1 5747 ++ FBtr0300326 4823 2545 2844 contig56 55020 11121 16943 2 30,45, 2545,2799, 11121,16898, 39 9 0 0 0 0 0 0 ++ FBtr0300326 4823 2805 2853 contig56 55020 44922 44970 1 48, 2805, 44922, 63 18 0 0 1 215 1 773 ++ FBtr0300326 4823 2539 2835 contig55 40015 6868 7722 2 33,48, 2539,2787, 6868,7674, 42 12 0 0 0 0 0 0 ++ FBtr0300326 4823 2805 2859 contig46 50012 18047 18101 1 54, 2805, 18047, 57 21 0 0 0 0 0 0 ++ FBtr0300326 4823 2776 2854 contig41 60014 49022 49100 1 78, 2776, 49022, 68 16 0 0 1 231 1 17935 ++ FBtr0300326 4823 2538 2853 contig40 60015 6537 24556 2 36,48, 2538,2805, 6537,24508, 46 8 0 0 0 0 0 0 ++ FBtr0300326 4823 2799 2853 contig38 50017 10792 10846 1 54, 2799, 10792, 46 8 0 0 0 0 0 0 ++ FBtr0300326 4823 2799 2853 contig37 50013 25795 25849 1 54, 2799, 25795, 39 6 0 0 0 0 0 0 ++ FBtr0300326 4823 2798 2843 contig14 45010 5355 5400 1 45, 2798, 5355, 45 9 0 0 0 0 0 0 ++ FBtr0300326 4823 2799 2853 contig13 45015 20364 20418 1 54, 2799, 20364, 39 9 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig7 50017 13278 13326 1 48, 1838, 36691, 50 10 0 0 0 0 0 0 +- FBtr0070075 2430 1826 1886 contig67 44531 31857 31917 1 60, 1826, 12614, 40 8 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig66 45011 6949 6997 1 48, 1838, 38014, 43 5 0 0 0 0 1 32484 +- FBtr0070075 2430 1838 1886 contig65 45013 6838 39370 2 17,31, 1838,1855, 5643,38144, 39 9 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig61 40008 1713 1761 1 48, 1838, 38247, 39 9 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig60 50013 16718 16766 1 48, 1838, 33247, 39 9 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig6 40015 23282 23330 1 48, 1838, 16685, 38 7 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1883 contig51 50015 4265 4310 1 45, 1838, 45705, 38 7 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1883 contig50 40009 19266 19311 1 45, 1838, 20698, 39 9 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig33 40016 10953 11001 1 48, 1838, 29015, 39 9 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig32 40014 25955 26003 1 48, 1838, 14011, 38 7 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1883 contig25 75023 20928 20973 1 45, 1838, 54050, 41 7 0 0 0 0 0 0 +- FBtr0070075 2430 1838 1886 contig15 50014 19711 19759 1 48, 1838, 30255, 69 18 0 0 1 202 1 20788 +- FBtr0300326 4823 2540 2829 contig64 40016 8089 28964 2 33,54, 2540,2775, 11052,31873, 69 18 0 0 1 202 1 20788 +- FBtr0300326 4823 2540 2829 contig63 55021 23094 43969 2 33,54, 2540,2775, 11052,31873, 41 10 0 0 0 0 0 0 +- FBtr0300326 4823 2799 2850 contig6 40015 32155 32206 1 51, 2799, 7809, 39 6 0 0 0 0 0 0 +- FBtr0300326 4823 2798 2843 contig54 35008 16481 16526 1 45, 2798, 18482, 39 6 0 0 0 0 0 0 +- FBtr0300326 4823 2798 2843 contig53 50013 36486 36531 1 45, 2798, 13482, 51 15 0 0 0 0 0 0 +- FBtr0300326 4823 2787 2853 contig51 50015 23765 23831 1 66, 2787, 26184, 67 17 0 0 1 223 1 20545 +- FBtr0300326 4823 2538 2845 contig44 50013 3422 24051 2 36,48, 2538,2797, 25962,46543, 45 12 0 0 0 0 0 0 +- FBtr0300326 4823 2787 2844 contig32 40014 27422 27479 1 57, 2787, 12535, 47 10 0 0 0 0 0 0 +- FBtr0300326 4823 2801 2858 contig3 40006 825 882 1 57, 2801, 39124, 76 14 0 0 1 224 1 159 +- FBtr0300326 4823 2538 2852 contig23 50012 33494 33743 2 36,54, 2538,2798, 16269,16464, 40 8 0 0 0 0 0 0 +- FBtr0300326 4823 2805 2853 contig12 56019 24590 24638 1 48, 2805, 31381,