annotate tool_dependencies.xml @ 0:04fdd0070044 draft default tip

planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
author yhoogstrate
date Tue, 29 Mar 2016 03:51:18 -0400
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04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
yhoogstrate
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1 <?xml version="1.0"?>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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2 <tool_dependency>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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3 <package name="EGA_download_streamer" version="2.1.6">
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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4 <install version="1.0">
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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5 <actions>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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6 <action type="download_by_url" sha256sum="20d5cdfd45f2546903934e203df54438ffe9d9762c0976199c1595442f59264e">https://www.ebi.ac.uk/ega/sites/ebi.ac.uk.ega/files/documents/EgaDemoClient_2.1.6.zip</action>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
yhoogstrate
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7 <action type="move_file">
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
yhoogstrate
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8 <source>EgaDemoClient.jar</source>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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9 <destination>$INSTALL_DIR/jars</destination>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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10 </action>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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11 <action type="set_environment">
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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12 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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13 </action>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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14 </actions>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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15 </install>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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16 <readme>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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17 Individual files or whole datasets may be downloaded from European Genome-phenome Archive (EGA) in a secure manner by first placing a download request and then downloading the file/s associated with the request. All files are automatically encrypted prior to streaming and must be decrypted using the streamer after download is complete.
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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18
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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19 https://www.ebi.ac.uk/ega/about/your_EGA_account/download_streaming_client#about
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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20 </readme>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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21 </package>
04fdd0070044 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 72bbd9452fb48044cfafb0074b49a67a8530ff9c
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22 </tool_dependency>