annotate xlsx2tab.R @ 6:aa529f924b86 draft

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author ylebras
date Tue, 04 Dec 2018 20:15:41 -0500
parents 97c4e2e4f07e
children 25b2fb62d16a
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1 #!/usr/bin/env Rscript
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2 #Read Xlsx sheets - return tabular
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3 library(readxl)
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5 args = commandArgs(trailingOnly=TRUE)
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7 newname<-args[1]+".xlsx"
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8 file.rename(args[1],newname)
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9 sheet<-read_excel(newname,sheet=args[2])
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10 write.table(sheet,"out.tabular",sep="\t",row.names=FALSE)
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12 }
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