Mercurial > repos > ynewton > extract_tumor_vs_normal_tcga_ids
comparison get_normal_vs_tumor_sample_ids.xml @ 4:1728895db87e draft default tip
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| author | ynewton |
|---|---|
| date | Thu, 17 Jan 2013 20:24:14 -0500 |
| parents | 28d795d45ca2 |
| children |
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| 3:28d795d45ca2 | 4:1728895db87e |
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| 1 <tool id="extract_tumor_vs_normal_ID_lists" name="Extract_tumor_vs_normal_TCGA_IDs" version="1.0.0"> | 1 <tool id="extract_tumor_vs_normal_ID_lists" name="Extract_tumor_vs_normal_TCGA_IDs" version="1.0.0"> |
| 2 <description>Extract normal vs. tumor IDs for TCGA samples</description> | 2 <description>Extract normal vs. tumor IDs for TCGA samples</description> |
| 3 <command interpreter="python">get_normal_vs_tumor_sample_ids.py --in_matrix $tableData --out_normals $outfile1 --out_tumor $outfile2 | 3 <command interpreter="Python">get_normal_vs_tumor_sample_ids.py --in_matrix $tableData --out_normals $outfile1 --out_tumor $outfile2 |
| 4 </command> | 4 </command> |
| 5 <inputs> | 5 <inputs> |
| 6 <param name="tableData" format="tabular" type="data" label="Input data"/> | 6 <param name="tableData" format="tabular" type="data" label="Input data"/> |
| 7 </inputs> | 7 </inputs> |
| 8 <outputs> | 8 <outputs> |