comparison get_normal_vs_tumor_sample_ids.xml @ 1:5240f8985481 draft

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1:5240f8985481

<tool id="extract_tumor_vs_normal_ID_lists" name="Extract tumor vs. normal TCGA IDs" version="1.0.0">
  <description>Extract normal vs. tumor IDs for TCGA samples</description>
  <command interpreter="python">get_normal_vs_tumor_sample_ids.py --in_matrix $tableData --out_normals $outfile1 --out_tumor $outfile2
  </command>
  <inputs>
	  <param name="tableData" format="tabular" type="data" label="Input data"/>
  </inputs>
  <outputs>
      <data name="outfile1" format="tabular"/>
      <data name="outfile2" format="tabular"/>
  </outputs>
  <help>
**What it does**

Takes a matrix of TCGA samples and extract two lists: normal sample IDs and tumor sample IDs.

  </help>   
</tool>