Mercurial > repos > yufei-luo > s_mart

annotate SMART/galaxy/ConvertTranscriptFile_Gff2ToCsv.xml @ 31:0ab839023fe4

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author m-zytnicki
date Tue, 30 Apr 2013 14:33:21 -0400
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1 <tool id="ConvertTranscriptFile_Gff2ToCsv" name="Gff2 -> Csv">
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2 <description>Convert Gff2 File to Csv File.</description>
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3 <command interpreter="python"> ../Java/Python/convertTranscriptFile.py -i $inputFile -f gff2 -o $outputFile -g csv yes 2>$logFile </command>
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4 <inputs>
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5 <param name="inputFile" type="data" label="Input File" format="gff"/>
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6 </inputs>
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7
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8 <outputs>
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9 <data format="csv" name="outputFile" label="[gff2 -> csv] Output File"/>
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10 <data format="txt" name="logFile" label="[gff2 -> csv] Log File"/>
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11 </outputs>
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12
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13 <help>
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14 </help>
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15 </tool>