Mercurial > repos > yufei-luo > s_mart

comparison SMART/Java/Python/100% @ 31:0ab839023fe4

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author m-zytnicki
date Tue, 30 Apr 2013 14:33:21 -0400
parents
children
comparison
equal deleted inserted replaced
30:5677346472b5 31:0ab839023fe4
1
2 R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows"
3 Copyright (C) 2012 The R Foundation for Statistical Computing
4 ISBN 3-900051-07-0
5 Platform: x86_64-pc-linux-gnu (64-bit)
6
7 R is free software and comes with ABSOLUTELY NO WARRANTY.
8 You are welcome to redistribute it under certain conditions.
9 Type 'license()' or 'licence()' for distribution details.
10
11 Natural language support but running in an English locale
12
13 R is a collaborative project with many contributors.
14 Type 'contributors()' for more information and
15 'citation()' on how to cite R or R packages in publications.
16
17 Type 'demo()' for some demos, 'help()' for on-line help, or
18 'help.start()' for an HTML browser interface to help.
19 Type 'q()' to quit R.
20
21 [Previously saved workspace restored]
22
23 > library(extrafont)
24 Registering fonts with R
25 There were 50 or more warnings (use warnings() to see the first 50)
26 > loadfonts()
27 Padauk already registered with pdfFonts().
28 Padauk Book already registered with pdfFonts().
29 Abyssinica SIL already registered with pdfFonts().
30 cmex10 already registered with pdfFonts().
31 cmmi10 already registered with pdfFonts().
32 cmr10 already registered with pdfFonts().
33 cmsy10 already registered with pdfFonts().
34 DejaVu Sans already registered with pdfFonts().
35 DejaVu Sans Condensed already registered with pdfFonts().
36 DejaVu Sans Light already registered with pdfFonts().
37 DejaVu Sans Mono already registered with pdfFonts().
38 DejaVu Serif already registered with pdfFonts().
39 DejaVu Serif Condensed already registered with pdfFonts().
40 Droid Arabic Naskh already registered with pdfFonts().
41 Droid Sans already registered with pdfFonts().
42 Droid Sans Armenian already registered with pdfFonts().
43 Droid Sans Ethiopic already registered with pdfFonts().
44 Droid Sans Fallback already registered with pdfFonts().
45 Droid Sans Georgian already registered with pdfFonts().
46 Droid Sans Hebrew already registered with pdfFonts().
47 Droid Sans Mono already registered with pdfFonts().
48 Droid Sans Thai already registered with pdfFonts().
49 Droid Serif already registered with pdfFonts().
50 esint10 already registered with pdfFonts().
51 eufm10 already registered with pdfFonts().
52 FreeMono already registered with pdfFonts().
53 FreeSans already registered with pdfFonts().
54 FreeSerif already registered with pdfFonts().
55 gargi already registered with pdfFonts().
56 Garuda already registered with pdfFonts().
57 Gentium already registered with pdfFonts().
58 GentiumAlt already registered with pdfFonts().
59 Gentium Basic already registered with pdfFonts().
60 Gentium Book Basic already registered with pdfFonts().
61 Junicode already registered with pdfFonts().
62 KacstArt already registered with pdfFonts().
63 KacstBook already registered with pdfFonts().
64 KacstDecorative already registered with pdfFonts().
65 KacstDigital already registered with pdfFonts().
66 KacstFarsi already registered with pdfFonts().
67 KacstLetter already registered with pdfFonts().
68 KacstNaskh already registered with pdfFonts().
69 KacstOffice already registered with pdfFonts().
70 KacstOne already registered with pdfFonts().
71 KacstPen already registered with pdfFonts().
72 KacstPoster already registered with pdfFonts().
73 KacstQurn already registered with pdfFonts().
74 KacstScreen already registered with pdfFonts().
75 KacstTitle already registered with pdfFonts().
76 KacstTitleL already registered with pdfFonts().
77 Kedage already registered with pdfFonts().
78 Khmer OS already registered with pdfFonts().
79 Khmer OS System already registered with pdfFonts().
80 LKLUG already registered with pdfFonts().
81 Lohit Bengali already registered with pdfFonts().
82 Lohit Gujarati already registered with pdfFonts().
83 Lohit Hindi already registered with pdfFonts().
84 Lohit Punjabi already registered with pdfFonts().
85 Lohit Tamil already registered with pdfFonts().
86 Loma already registered with pdfFonts().
87 Mallige already registered with pdfFonts().
88 MarVoSym already registered with pdfFonts().
89 Meera already registered with pdfFonts().
90 mry_KacstQurn already registered with pdfFonts().
91 msam10 already registered with pdfFonts().
92 msbm10 already registered with pdfFonts().
93 Mukti Narrow already registered with pdfFonts().
94 NanumGothic already registered with pdfFonts().
95 NanumMyeongjo already registered with pdfFonts().
96 OpenSymbol already registered with pdfFonts().
97 Phetsarath OT already registered with pdfFonts().
98 Pothana2000 already registered with pdfFonts().
99 Purisa already registered with pdfFonts().
100 Rachana already registered with pdfFonts().
101 Rekha already registered with pdfFonts().
102 rsfs10 already registered with pdfFonts().
103 Saab already registered with pdfFonts().
104 Sawasdee already registered with pdfFonts().
105 Tibetan Machine Uni already registered with pdfFonts().
106 TlwgMono already registered with pdfFonts().
107 TlwgTypewriter already registered with pdfFonts().
108 Tlwg Typist already registered with pdfFonts().
109 Tlwg Typo already registered with pdfFonts().
110 Ubuntu already registered with pdfFonts().
111 Ubuntu Condensed already registered with pdfFonts().
112 Ubuntu Light already registered with pdfFonts().
113 Ubuntu Mono already registered with pdfFonts().
114 Ume Gothic already registered with pdfFonts().
115 Ume Gothic C4 already registered with pdfFonts().
116 Ume Gothic C5 already registered with pdfFonts().
117 Ume Gothic O5 already registered with pdfFonts().
118 Ume Gothic S4 already registered with pdfFonts().
119 Ume Gothic S5 already registered with pdfFonts().
120 Ume P Gothic already registered with pdfFonts().
121 Ume P Gothic C4 already registered with pdfFonts().
122 Ume P Gothic C5 already registered with pdfFonts().
123 Ume P Gothic O5 already registered with pdfFonts().
124 Ume P Gothic S4 already registered with pdfFonts().
125 Ume P Gothic S5 already registered with pdfFonts().
126 Ume UI Gothic already registered with pdfFonts().
127 Ume UI Gothic O5 already registered with pdfFonts().
128 UnBatang already registered with pdfFonts().
129 UnDotum already registered with pdfFonts().
130 UnGraphic already registered with pdfFonts().
131 UnGungseo already registered with pdfFonts().
132 UnPilgi already registered with pdfFonts().
133 utkal already registered with pdfFonts().
134 Vemana2000 already registered with pdfFonts().
135 VL Gothic already registered with pdfFonts().
136 VL PGothic already registered with pdfFonts().
137 Waree already registered with pdfFonts().
138 wasy10 already registered with pdfFonts().
139 There were 26 warnings (use warnings() to see them)
140 > library(ggplot2)
141 > data <- read.table("tmpFile36240.dat", header = T)
142 > data$Sample <- factor(data$Sample, levels=c("Col", "rtl2", "35S::RTL2#1", "35S::RTL2#2", "35S::RTL1#1", "dcl2dcl3dcl4"))
143 > data$Size <- factor(data$Size, levels=c(21, 22, 23, 24))
144 > png("/home/mzytnick/Desktop/Projects/Vaucheret/RTrna/MiRna/genomicSizes.png", width = 1000, height = 200)
145 > ggplot(data, aes(x = Size, y = Count, fill = Size)) + geom_bar(stat = "identity") + facet_grid(. ~ Sample, space="free_x") + xlab("Sizes") + ylab("Count") + scale_fill_manual(values = c("blue", "green", "pink", "red")) + theme(legend.position = "none", panel.grid.major = element_blank(), panel.grid.minor = element_blank(), panel.background = element_blank())
146 > dev.off()
147 null device
148 1
149 >
150 > proc.time()
151 user system elapsed
152 1.884 0.088 3.163