comparison SMART/galaxy/modifySequenceList.xml @ 31:0ab839023fe4

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30:5677346472b5

<tool id="modifySequenceList" name="modify sequence list">
  <description>Extend or shring a list of sequences. </description>
	<requirements>
		<requirement type="set_environment">PYTHONPATH</requirement>
	</requirements>
  <command interpreter="python"> ../Java/Python/modifySequenceList.py -i $inputFile -f fasta
	#if $OptionStart.Start == "Yes":
		-s $OptionStart.StartVal
	#end if		
	#if $OptionEnd.End == "Yes":

		</when>
	</conditional>	
  </inputs>

  <outputs>
    	<data format="fasta" name="outputFile" label="[modify sequence list] output file"/>
  </outputs>

  <help>
  This tool reads a list of sequences (in multi-FASTA/Q format) that you provide and shrinks each sequence to the *n* first nucleotides or the *n* last nucleotides.
  </help>
</tool>

31:0ab839023fe4

<tool id="modifySequenceList" name="modify sequence list">
  <description>Extend or shring a list of sequences. </description>
  <command interpreter="python"> ../Java/Python/modifySequenceList.py -i $inputFile -f fasta
	#if $OptionStart.Start == "Yes":
		-s $OptionStart.StartVal
	#end if		
	#if $OptionEnd.End == "Yes":

		</when>
	</conditional>	
  </inputs>

  <outputs>
    	<data format="fasta" name="outputFile" label="[modifySequenceList] Output File"/>
  </outputs>

</tool>