Mercurial > repos > yufei-luo > s_mart

diff SMART/galaxy/modifySequenceList.xml @ 31:0ab839023fe4

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Uploaded
author m-zytnicki
date Tue, 30 Apr 2013 14:33:21 -0400
parents 94ab73e8a190
children
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--- a/SMART/galaxy/modifySequenceList.xml	Mon Apr 29 03:45:52 2013 -0400
+++ b/SMART/galaxy/modifySequenceList.xml	Tue Apr 30 14:33:21 2013 -0400
@@ -1,8 +1,5 @@
 <tool id="modifySequenceList" name="modify sequence list">
   <description>Extend or shring a list of sequences. </description>
-	<requirements>
-		<requirement type="set_environment">PYTHONPATH</requirement>
-	</requirements>
   <command interpreter="python"> ../Java/Python/modifySequenceList.py -i $inputFile -f fasta
 	#if $OptionStart.Start == "Yes":
 		-s $OptionStart.StartVal
@@ -43,10 +40,7 @@
   </inputs>
 
   <outputs>
-    	<data format="fasta" name="outputFile" label="[modify sequence list] output file"/>
+    	<data format="fasta" name="outputFile" label="[modifySequenceList] Output File"/>
   </outputs>
 
-  <help>
-  This tool reads a list of sequences (in multi-FASTA/Q format) that you provide and shrinks each sequence to the *n* first nucleotides or the *n* last nucleotides.
-  </help>
 </tool>