comparison SMART/DiffExpAnal/listInputs.xml @ 18:94ab73e8a190

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author m-zytnicki
date Mon, 29 Apr 2013 03:20:15 -0400
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17:b0e8584489e6 18:94ab73e8a190
1 <tool id="listInputs" name="listInputs">
2 <description>Give a list of input files from different conditions/groups for DESeq analysis, DESeq can then charge these input files from the given list.</description>
3 <command interpreter="perl"> listInputs.pl $inputFromGroup1 $inputFromGroup2 $output
4 </command>
5
6 <inputs>
7 <param name="inputFromGroup1" type="data" format="tabular" label="Please choose your file from group1."/>
8 <param name="inputFromGroup2" type="data" format="tabular" label="Please choose your file from group2."/>
9 </inputs>
10
11 <outputs>
12 <data format="txt" name="output" label="listInputs Output"/>
13 </outputs>
14
15 <help>
16 This tool can facilate the the chargement for DESeq tool.
17 Example:
18 From group1, we have input1.
19 From group2, we have input2.
20 This tool will give us a list like:
21 fileID=1 input1 group1
22 fileID=2 input2 group2
23 Where the value of fileID is unique for each input file.
24 </help>
25 </tool>