Mercurial > repos > yufei-luo > s_mart

diff SMART/galaxy/computeCoverage.xml @ 15:440ceca58672

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Uploaded
author m-zytnicki
date Mon, 22 Apr 2013 11:08:07 -0400
parents 769e306b7933
children 94ab73e8a190
line wrap: on
line diff
--- a/SMART/galaxy/computeCoverage.xml	Fri Apr 19 10:13:11 2013 -0400
+++ b/SMART/galaxy/computeCoverage.xml	Mon Apr 22 11:08:07 2013 -0400
@@ -1,4 +1,4 @@
-<tool id="ComputeCoverage" name="Compute coverage">
+<tool id="ComputeCoverage" name="compute coverage">
     <description>Compute the coverage of a set with respect to another set.</description>
     <command interpreter="python">
         ../Java/Python/ComputeCoverage.py -i $formatType.inputFileName1
@@ -103,5 +103,8 @@
 		<data name="outputFileGff" format="gff3" label="[computeCoverage] OUTPUT file"/>
 	</outputs> 
 	
+	<help>
+This tool considers a query and a reference files, and gives the coverage of the query file by the reference. The output file is similar to the query file, where a tag **coverage** has been added.
+	</help>
 </tool>