Mercurial > repos > yufei-luo > s_mart
view SMART/bacteriaRegulatoryRegion_Detection/colorGff.xml @ 18:94ab73e8a190
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author | m-zytnicki |
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date | Mon, 29 Apr 2013 03:20:15 -0400 |
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<tool id="colorGff" name="colorGff"> <description> Parses a DOOR report file and writes the information in a gff3 out file. </description> <command interpreter="perl"> colorGff.pl -i $inputFile -c $RGBcode > $outputFile </command> <inputs> <param name="inputFile" type="data" label="Input File" format="gff"/> <param name="RGBcode" type="text" value="250 128 114" help="RGB code is necessary for choosing the color."/> </inputs> <outputs> <data format="gff3" name="outputFile" label="[colorGff] Output File"/> </outputs> <help> Command example: perl colorGff.pl -i trans_covUp5_nbEUp10_lgUp50.gff3 -c "250 128 114" > trans_covUp5_nbEUp10_lgUp50_c.gff3 </help> </tool>