Mercurial > repos > yufei-luo > s_mart
view smart_toolShed/commons/core/launcher/test/Test_LauncherUtils.py @ 0:e0f8dcca02ed
Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
author | yufei-luo |
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date | Thu, 17 Jan 2013 10:52:14 -0500 |
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import unittest from commons.core.launcher.LauncherUtils import LauncherUtils class Test_LauncherUtils(unittest.TestCase): def test_createHomogeneousSizeList_empty(self): lHeadersSizeTuples = [] maxSize = 500 expLHeadersList = [] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_one_item_upper_mean(self): lHeadersSizeTuples = [("h1", 300)] maxSize = 500 expLHeadersList = [["h1"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_one_item_under_mean(self): lHeadersSizeTuples = [("h1", 100)] maxSize = 500 expLHeadersList = [["h1"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_3items(self): lHeadersSizeTuples = [("h1", 250), ("h2", 250), ("h3", 300)] maxSize = 500 expLHeadersList = [["h3"], ["h2"], ["h1"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_4items(self): lHeadersSizeTuples = [("h1", 100), ("h2", 200), ("h3", 10), ("h4", 400)] maxSize = 500 expLHeadersList = [["h4", "h3"], ["h2", "h1"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_5items(self): lHeadersSizeTuples = [("h1", 300), ("h2", 300), ("h3", 250), ("h4", 100), ("h5", 90)] maxSize = 500 expLHeadersList = [["h2", "h5","h4"], ["h1"], ["h3"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_all_upper_max(self): lHeadersSizeTuples = [("h1", 600), ("h2", 500), ("h3", 700), ("h4", 900), ("h5", 500)] maxSize = 500 expLHeadersList = [["h4"], ["h3"], ["h1"], ["h5"], ["h2"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_all_upper_mean(self): lHeadersSizeTuples = [("h1", 300), ("h2", 300), ("h3", 300), ("h4", 300), ("h5", 300)] maxSize = 500 expLHeadersList = [["h5"], ["h4"], ["h3"], ["h2"], ["h1"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_all_under_mean(self): lHeadersSizeTuples = [("h1", 100), ("h2", 100), ("h3", 100), ("h4", 100), ("h5", 100)] maxSize = 500 expLHeadersList = [["h5", "h4", "h3", "h2"], ["h1"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) def test_createHomogeneousSizeList_floats(self): lHeadersSizeTuples = [("h1", 99.1), ("h2", 100.7), ("h3", 100.1), ("h4", 100.1), ("h5", 100)] maxSize = 500 expLHeadersList = [['h2', 'h4', 'h3', 'h5'], ["h1"]] obsLHeadersList = LauncherUtils.createHomogeneousSizeList(lHeadersSizeTuples, maxSize) self.assertEquals(expLHeadersList, obsLHeadersList) if __name__ == "__main__": unittest.main()