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Repository metadata is associated with this change set.

Description: Need all_fasta.loc for cummerbund

Commit: 9:532a336a14c1

Parent: 8:fbbbc9fd8fb9

Commited by: b'Jim'

Pushed: 2014-10-13

Description: Use fasta_indexes tool_data_table

Commit: 8:fbbbc9fd8fb9

Parent: 7:b5562b9a55c7

Commited by: b'Jim'

Pushed: 2014-10-13

Description: Use same bias_correction cached param as devteam cuffdiff

Commit: 7:b5562b9a55c7

Parent: 6:137aab1d9ac1

Commited by: b'Jim'

Pushed: 2014-10-13

Description: Add metadata to datatype: CuffDataDB

Commit: 6:137aab1d9ac1

Parent: 5:2bb88bf1c1dd

Commited by: b'Jim'

Pushed: 2013-11-18

Description: Add tool_data_table_conf.xml.sample

Commit: 5:2bb88bf1c1dd

Parent: 4:57c13cd32044

Commited by: b'Jim'

Pushed: 2013-11-15

Description: Add tool-data/all_fasta.loc.sample for cummerbund_wrapper.xml

Commit: 4:57c13cd32044

Parent: 3:f109453ecfa2

Commited by: b'Jim'

Pushed: 2013-11-15

Description: readCufflinks() parses feature file based on file extension: .gtf/.gff3 Also added gtfFile and genome input to cummerbund_wrapper.xml

Commit: 3:f109453ecfa2

Parent: 2:fdf01b3c1841

Commited by: b'Jim'

Pushed: 2013-11-15

Repository metadata is associated with this change set.

Description: Update to new cuffdiff wrapper, add cuffdb_info.txt to cummerbund html output

Commit: 2:fdf01b3c1841

Parent: 1:ebb9a992508d

Commited by: b'Jim'

Pushed: 2013-11-08

Repository metadata is associated with this change set.

Description: Remove duplicate cds_diff_output option

Commit: 1:ebb9a992508d

Parent: 0:da7241f92ecf

Commited by: b'Jim'

Pushed: 2013-02-04

Description: Uploaded

Commit: 0:da7241f92ecf

Parent: None

Commited by: b'jjohnson'

Pushed: 2013-02-04