Repository 'prokka'
hg clone https://toolshed.g2.bx.psu.edu/repos/crs4/prokka

Changesets
Repository metadata is associated with this change set.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 3c234f3dbee389d82b065d9c685818f86838017c"
19:8a22554cdde2
18:d643e3b03500
b'iuc'
2021-11-16
Repository metadata is associated with this change set.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 442b1247ee31ec9872633be18784f346e4762486"
18:d643e3b03500
17:111884f0d912
b'iuc'
2021-02-13
Repository metadata is associated with this change set.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit e421c38873daaad1ee5e4e3ad59b38cb6bb34253"
17:111884f0d912
16:bf68eb663bc3
b'iuc'
2020-06-04
Repository metadata is associated with this change set.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 0d2c8359cf38498b417b395d081daad47d08ee40"
16:bf68eb663bc3
15:3a0bd09a41dd
b'iuc'
2020-01-19
Repository metadata is associated with this change set.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit f64c36610e6ca2240e4d745a5708d0d02ba4a16d"
15:3a0bd09a41dd
14:eaee459f3d69
b'iuc'
2019-12-02
Repository metadata is associated with this change set.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 9019ffd38b2b6692fc24c9b41ab2c2539050b01f
14:eaee459f3d69
13:a17498c603ec
b'iuc'
2018-03-28
Repository metadata is associated with this change set.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit ce8dd97ca529558ec475f5eb1f2ce40d765fe396
13:a17498c603ec
12:da479161bbe4
b'iuc'
2017-03-21
Repository metadata is associated with this change set.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 89e3a62dd6cbc8bcec84d08c1710bfb4e7f5938f
12:da479161bbe4
11:fd4b2f03cfc6
b'iuc'
2017-01-20
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit b391e22790013f0eebed85685b194c39ffcf17d8
11:fd4b2f03cfc6
10:6aa88a432ffc
b'iuc'
2016-10-29
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 9a92d439f147a5cf2370e0686854911107de1144
10:6aa88a432ffc
9:d004ca37843e
b'iuc'
2016-10-29
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit eb3de6339504064ed4c4fb188d0ef865bbc6cc98
9:d004ca37843e
8:392255fa7ab9
b'iuc'
2016-10-28
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 9a92d439f147a5cf2370e0686854911107de1144
8:392255fa7ab9
7:f5e44aad6498
b'iuc'
2016-10-28
Repository metadata is associated with this change set.
Support Prokka 1.11. Upgrade dependencies to package_barrnap_0_7, package_blast_plus_2_2_31, package_hmmer_3_1b2, package_tbl2asn_24_3.
7:f5e44aad6498
6:3ad7ef0ba385
b'crs4'
2015-10-01
Repository metadata is associated with this change set.
Use <stdio> because prokka writes some warnings on stderr. Update Orione citation. Update Prokka citation. Support Prokka 1.10. Upgrade dependencies to package_minced_0_1_6, package_barrnap_0_5 and package_tbl2asn_23_7. Added --proteins option. Add <citations>.
6:3ad7ef0ba385
5:b9fea998270a
b'crs4'
2014-10-27
Repository metadata is associated with this change set.
Fix Prokka 1.8 dependency installation.
5:b9fea998270a
4:5c0030f52b83
b'crs4'
2014-01-09
Support Prokka 1.8. Depend on package_minced_0_1_4 and package_tbl2asn_22_4 . Update citation.
4:5c0030f52b83
3:fffa1ae330ae
b'crs4'
2014-01-08
Repository metadata is associated with this change set.
Use $GALAXY_SLOTS instead of $PROKKA_SITE_OPTIONS. Upgrade Barrnap dependency to v. 0.3. Upgrade Infernal dependency to v. 1.1. Depend on package_gnu_parallel_20131122 (requires Galaxy release_2013.11.04 or later).
3:fffa1ae330ae
2:4bafaa074484
b'crs4'
2013-12-09
Repository metadata is associated with this change set.
Merge with Lionel Guy's wrapper. Directly call prokka, remove prokka.py . Add locustag, increment, gffver, compliant, addgenes, genus, species, strain, plasmid, gcode, usegenus, metagenome, fast, evalue, norrna, notrna params. Update BLAST+ dependency to 2.2.28. Add dependencies on prodigal and barrnap. Add readme.rst .
2:4bafaa074484
1:4b6f16a79fe4
b'crs4'
2013-10-25
Repository metadata is associated with this change set.
Add txt output file. Use a definition list instead of a block quote in <help>. Correct 2 dependency minimum versions.
1:4b6f16a79fe4
0:95505a9fa26f
b'crs4'
2013-09-26
Repository metadata is associated with this change set.
Uploaded
0:95505a9fa26f
None
b'crs4'
2013-09-10