Repository 'trimmomatic'
hg clone https://toolshed.g2.bx.psu.edu/repos/pjbriggs/trimmomatic

Changesets
Repository metadata is associated with this change set.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/packages/trimmomatic commit 6151dc895107d028c525362fb16b91388e10f2f2
17:b9aaed85cbd1
16:9a38087e3bfd
b'iuc'
2024-01-24
Repository metadata is associated with this change set.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/packages/trimmomatic commit ab36e4731731f12cce0e7d7cc3b50ba6a0bab1ef
16:9a38087e3bfd
15:32f1f56bd970
b'iuc'
2024-01-14
Repository metadata is associated with this change set.
Updated for Trimmomatic 0.39 and adds quality score options.
15:32f1f56bd970
14:d94aff5ee623
b'pjbriggs'
2023-03-02
Repository metadata is associated with this change set.
Version 0.38.1: add coreutils as dependency to fix tool issues with 'readlink -e' across platforms.
14:d94aff5ee623
13:898b67846b47
b'pjbriggs'
2020-03-26
Repository metadata is associated with this change set.
Updated to Trimmomatic 0.38.
13:898b67846b47
12:51b771646466
b'pjbriggs'
2019-07-08
Repository metadata is associated with this change set.
Uploaded fix from Marius van den Beek (make readlink more portable)
12:51b771646466
11:59054f086eca
b'pjbriggs'
2018-12-17
Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
11:59054f086eca
10:dfa082f84068
b'pjbriggs'
2018-10-05
Repository metadata is associated with this change set.
Uploaded version 0.36.5 (use conda to resolve tool dependencies)
10:dfa082f84068
9:53af7b5b1b56
b'pjbriggs'
2018-03-05
Repository metadata is associated with this change set.
Uploaded
9:53af7b5b1b56
8:415a165d92bb
b'pjbriggs'
2017-08-21
Uploaded v0.36.4.
8:415a165d92bb
7:6eeacf19a38e
b'pjbriggs'
2017-06-22
Repository metadata is associated with this change set.
Version 0.36.3: fix the naming of output collections to differentiate btwn paired/unpaired; document the _JAVA_OPTIONS env var (thanks Marius van den Beek).
7:6eeacf19a38e
6:141bba0e9a77
b'pjbriggs'
2017-03-21
Repository metadata is associated with this change set.
Uploaded v0.36.2 (adds support for compressed fastq inputs)
6:141bba0e9a77
5:f80107cdc406
b'pjbriggs'
2017-02-24
Repository metadata is associated with this change set.
Updated to 0.36.1: Reimplement to work with bioconda Trimmomatic 0.36 (toolshed version is still supported for now).
5:f80107cdc406
4:14d05f2d511d
b'pjbriggs'
2016-12-16
Repository metadata is associated with this change set.
Version that supports Trimmomatic 0.36.
4:14d05f2d511d
3:f8a9a5eaca8a
b'pjbriggs'
2016-07-14
Repository metadata is associated with this change set.
Updated to version 0.32.3: add support for FASTQ pairs (dataset collections)
3:f8a9a5eaca8a
2:a60283899c6d
b'pjbriggs'
2015-09-23
Repository metadata is associated with this change set.
Version 0.32.2: use GALAXY_SLOTS to set number of threads.
2:a60283899c6d
1:2bd7cdbb6228
b'pjbriggs'
2015-04-22
Repository metadata is associated with this change set.
Add README and citation tags.
1:2bd7cdbb6228
0:3358c3d30143
b'pjbriggs'
2014-12-09
Uploaded initial version.
0:3358c3d30143
None
b'pjbriggs'
2014-12-01